Protein–RNA interactions for Protein: Q8VE28

Nkd2, Protein naked cuticle homolog 2, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd2Q8VE28 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nkd2Q8VE28 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nkd2Q8VE28 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nkd2Q8VE28 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC18■□□□□ 0.47
Nkd2Q8VE28 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC18■□□□□ 0.47
Nkd2Q8VE28 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Nkd2Q8VE28 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Nkd2Q8VE28 Slc35b2-207ENSMUST00000226086 850 ntBASIC18■□□□□ 0.47
Nkd2Q8VE28 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC18■□□□□ 0.47
Nkd2Q8VE28 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Nkd2Q8VE28 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Nkd2Q8VE28 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC18■□□□□ 0.47
Nkd2Q8VE28 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nkd2Q8VE28 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nkd2Q8VE28 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nkd2Q8VE28 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Nkd2Q8VE28 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC17.99■□□□□ 0.47
Nkd2Q8VE28 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC17.99■□□□□ 0.47
Nkd2Q8VE28 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nkd2Q8VE28 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nkd2Q8VE28 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
Nkd2Q8VE28 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Nkd2Q8VE28 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nkd2Q8VE28 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nkd2Q8VE28 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nkd2Q8VE28 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC17.99■□□□□ 0.47
Nkd2Q8VE28 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Nkd2Q8VE28 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nkd2Q8VE28 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Nkd2Q8VE28 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nkd2Q8VE28 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nkd2Q8VE28 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nkd2Q8VE28 Gm43137-201ENSMUST00000198052 594 ntBASIC17.98■□□□□ 0.47
Nkd2Q8VE28 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nkd2Q8VE28 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC17.98■□□□□ 0.47
Nkd2Q8VE28 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nkd2Q8VE28 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nkd2Q8VE28 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nkd2Q8VE28 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
Nkd2Q8VE28 Gm2011-201ENSMUST00000203124 1263 ntBASIC17.97■□□□□ 0.47
Nkd2Q8VE28 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nkd2Q8VE28 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nkd2Q8VE28 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nkd2Q8VE28 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nkd2Q8VE28 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Nkd2Q8VE28 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nkd2Q8VE28 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nkd2Q8VE28 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Nkd2Q8VE28 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nkd2Q8VE28 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
Nkd2Q8VE28 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Nkd2Q8VE28 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Nkd2Q8VE28 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC17.96■□□□□ 0.47
Nkd2Q8VE28 Gm21168-201ENSMUST00000199646 1096 ntBASIC17.96■□□□□ 0.47
Nkd2Q8VE28 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nkd2Q8VE28 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nkd2Q8VE28 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nkd2Q8VE28 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Nkd2Q8VE28 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
Nkd2Q8VE28 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nkd2Q8VE28 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC17.95■□□□□ 0.46
Nkd2Q8VE28 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Nkd2Q8VE28 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nkd2Q8VE28 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nkd2Q8VE28 AC158990.1-201ENSMUST00000221450 2016 ntBASIC17.95■□□□□ 0.46
Nkd2Q8VE28 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Nkd2Q8VE28 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC17.95■□□□□ 0.46
Nkd2Q8VE28 Mir7075-201ENSMUST00000184187 82 ntBASIC17.95■□□□□ 0.46
Nkd2Q8VE28 Krt8-ps-201ENSMUST00000208495 945 ntBASIC17.95■□□□□ 0.46
Nkd2Q8VE28 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nkd2Q8VE28 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC17.95■□□□□ 0.46
Nkd2Q8VE28 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nkd2Q8VE28 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nkd2Q8VE28 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nkd2Q8VE28 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC17.94■□□□□ 0.46
Nkd2Q8VE28 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC17.94■□□□□ 0.46
Nkd2Q8VE28 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC17.94■□□□□ 0.46
Nkd2Q8VE28 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC17.94■□□□□ 0.46
Nkd2Q8VE28 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Nkd2Q8VE28 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nkd2Q8VE28 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nkd2Q8VE28 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Nkd2Q8VE28 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Nkd2Q8VE28 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC17.94■□□□□ 0.46
Nkd2Q8VE28 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nkd2Q8VE28 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nkd2Q8VE28 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Nkd2Q8VE28 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nkd2Q8VE28 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nkd2Q8VE28 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nkd2Q8VE28 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Nkd2Q8VE28 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nkd2Q8VE28 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nkd2Q8VE28 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nkd2Q8VE28 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nkd2Q8VE28 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC17.93■□□□□ 0.46
Nkd2Q8VE28 Gm43759-201ENSMUST00000196925 1261 ntBASIC17.93■□□□□ 0.46
Nkd2Q8VE28 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nkd2Q8VE28 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nkd2Q8VE28 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC17.93■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms