Protein–RNA interactions for Protein: Q8VDS4

Rprd1a, Regulation of nuclear pre-mRNA domain-containing protein 1A, mousemouse

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rprd1aQ8VDS4 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC20.38■□□□□ 0.85
Rprd1aQ8VDS4 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rprd1aQ8VDS4 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rprd1aQ8VDS4 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Rprd1aQ8VDS4 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rprd1aQ8VDS4 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
Rprd1aQ8VDS4 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rprd1aQ8VDS4 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Rprd1aQ8VDS4 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rprd1aQ8VDS4 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rprd1aQ8VDS4 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rprd1aQ8VDS4 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Rprd1aQ8VDS4 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rprd1aQ8VDS4 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rprd1aQ8VDS4 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rprd1aQ8VDS4 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC20.37■□□□□ 0.85
Rprd1aQ8VDS4 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rprd1aQ8VDS4 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rprd1aQ8VDS4 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rprd1aQ8VDS4 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Rprd1aQ8VDS4 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rprd1aQ8VDS4 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC20.36■□□□□ 0.85
Rprd1aQ8VDS4 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Rprd1aQ8VDS4 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rprd1aQ8VDS4 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Rprd1aQ8VDS4 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rprd1aQ8VDS4 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC20.36■□□□□ 0.85
Rprd1aQ8VDS4 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rprd1aQ8VDS4 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Rprd1aQ8VDS4 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rprd1aQ8VDS4 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Rprd1aQ8VDS4 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Rprd1aQ8VDS4 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.35■□□□□ 0.85
Rprd1aQ8VDS4 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rprd1aQ8VDS4 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rprd1aQ8VDS4 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Rprd1aQ8VDS4 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rprd1aQ8VDS4 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rprd1aQ8VDS4 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rprd1aQ8VDS4 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Rprd1aQ8VDS4 Gm43017-201ENSMUST00000198296 752 ntBASIC20.34■□□□□ 0.85
Rprd1aQ8VDS4 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC20.34■□□□□ 0.85
Rprd1aQ8VDS4 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC20.34■□□□□ 0.85
Rprd1aQ8VDS4 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rprd1aQ8VDS4 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rprd1aQ8VDS4 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rprd1aQ8VDS4 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Rprd1aQ8VDS4 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rprd1aQ8VDS4 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rprd1aQ8VDS4 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rprd1aQ8VDS4 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Rprd1aQ8VDS4 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC20.33■□□□□ 0.85
Rprd1aQ8VDS4 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Rprd1aQ8VDS4 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Rprd1aQ8VDS4 Serp2-204ENSMUST00000228055 705 ntBASIC20.33■□□□□ 0.85
Rprd1aQ8VDS4 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.33■□□□□ 0.85
Rprd1aQ8VDS4 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Rprd1aQ8VDS4 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Rprd1aQ8VDS4 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Rprd1aQ8VDS4 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Rprd1aQ8VDS4 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Rprd1aQ8VDS4 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC20.32■□□□□ 0.84
Rprd1aQ8VDS4 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC20.32■□□□□ 0.84
Rprd1aQ8VDS4 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rprd1aQ8VDS4 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Rprd1aQ8VDS4 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rprd1aQ8VDS4 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rprd1aQ8VDS4 Flvcr1-202ENSMUST00000191946 1216 ntBASIC20.32■□□□□ 0.84
Rprd1aQ8VDS4 Gm43173-201ENSMUST00000202246 593 ntBASIC20.32■□□□□ 0.84
Rprd1aQ8VDS4 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rprd1aQ8VDS4 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Rprd1aQ8VDS4 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC20.32■□□□□ 0.84
Rprd1aQ8VDS4 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rprd1aQ8VDS4 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rprd1aQ8VDS4 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rprd1aQ8VDS4 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rprd1aQ8VDS4 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rprd1aQ8VDS4 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rprd1aQ8VDS4 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rprd1aQ8VDS4 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Rprd1aQ8VDS4 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rprd1aQ8VDS4 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
Rprd1aQ8VDS4 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Rprd1aQ8VDS4 Gm10616-201ENSMUST00000205285 2127 ntBASIC20.3■□□□□ 0.84
Rprd1aQ8VDS4 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Rprd1aQ8VDS4 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC20.3■□□□□ 0.84
Rprd1aQ8VDS4 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
Rprd1aQ8VDS4 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rprd1aQ8VDS4 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rprd1aQ8VDS4 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC20.3■□□□□ 0.84
Rprd1aQ8VDS4 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC20.3■□□□□ 0.84
Rprd1aQ8VDS4 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rprd1aQ8VDS4 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Rprd1aQ8VDS4 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rprd1aQ8VDS4 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Rprd1aQ8VDS4 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC20.29■□□□□ 0.84
Rprd1aQ8VDS4 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Rprd1aQ8VDS4 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
Rprd1aQ8VDS4 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC20.29■□□□□ 0.84
Rprd1aQ8VDS4 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC20.29■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 8.7 ms