Protein–RNA interactions for Protein: Q8R4U6

Top1mt, DNA topoisomerase I, mitochondrial, mousemouse

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Top1mtQ8R4U6 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Top1mtQ8R4U6 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Top1mtQ8R4U6 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Top1mtQ8R4U6 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC23.77■■□□□ 1.4
Top1mtQ8R4U6 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
Top1mtQ8R4U6 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Top1mtQ8R4U6 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Top1mtQ8R4U6 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC23.76■■□□□ 1.39
Top1mtQ8R4U6 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
Top1mtQ8R4U6 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Top1mtQ8R4U6 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC23.76■■□□□ 1.39
Top1mtQ8R4U6 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Top1mtQ8R4U6 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Top1mtQ8R4U6 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Top1mtQ8R4U6 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Top1mtQ8R4U6 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
Top1mtQ8R4U6 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC23.75■■□□□ 1.39
Top1mtQ8R4U6 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Top1mtQ8R4U6 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Top1mtQ8R4U6 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Top1mtQ8R4U6 Gm9207-201ENSMUST00000198773 1115 ntBASIC23.74■■□□□ 1.39
Top1mtQ8R4U6 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Top1mtQ8R4U6 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Top1mtQ8R4U6 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Top1mtQ8R4U6 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Top1mtQ8R4U6 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Top1mtQ8R4U6 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Top1mtQ8R4U6 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Top1mtQ8R4U6 Cdkn3-203ENSMUST00000227149 1952 ntBASIC23.73■■□□□ 1.39
Top1mtQ8R4U6 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Top1mtQ8R4U6 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC23.73■■□□□ 1.39
Top1mtQ8R4U6 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Top1mtQ8R4U6 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC23.73■■□□□ 1.39
Top1mtQ8R4U6 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Top1mtQ8R4U6 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Top1mtQ8R4U6 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Top1mtQ8R4U6 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
Top1mtQ8R4U6 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Top1mtQ8R4U6 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC23.72■■□□□ 1.39
Top1mtQ8R4U6 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Top1mtQ8R4U6 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC23.72■■□□□ 1.39
Top1mtQ8R4U6 Gm6085-201ENSMUST00000182774 1470 ntBASIC23.72■■□□□ 1.39
Top1mtQ8R4U6 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Top1mtQ8R4U6 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Top1mtQ8R4U6 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Top1mtQ8R4U6 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC23.71■■□□□ 1.39
Top1mtQ8R4U6 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC23.71■■□□□ 1.39
Top1mtQ8R4U6 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Top1mtQ8R4U6 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Top1mtQ8R4U6 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
Top1mtQ8R4U6 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
Top1mtQ8R4U6 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
Top1mtQ8R4U6 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC23.7■■□□□ 1.38
Top1mtQ8R4U6 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.38
Top1mtQ8R4U6 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC23.7■■□□□ 1.38
Top1mtQ8R4U6 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
Top1mtQ8R4U6 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Top1mtQ8R4U6 Gm6802-201ENSMUST00000167843 1983 ntBASIC23.69■■□□□ 1.38
Top1mtQ8R4U6 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Top1mtQ8R4U6 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Top1mtQ8R4U6 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC23.69■■□□□ 1.38
Top1mtQ8R4U6 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Top1mtQ8R4U6 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Top1mtQ8R4U6 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Top1mtQ8R4U6 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Top1mtQ8R4U6 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
Top1mtQ8R4U6 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Top1mtQ8R4U6 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Top1mtQ8R4U6 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC23.68■■□□□ 1.38
Top1mtQ8R4U6 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC23.68■■□□□ 1.38
Top1mtQ8R4U6 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC23.68■■□□□ 1.38
Top1mtQ8R4U6 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC23.68■■□□□ 1.38
Top1mtQ8R4U6 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Top1mtQ8R4U6 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
Top1mtQ8R4U6 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Top1mtQ8R4U6 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Top1mtQ8R4U6 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
Top1mtQ8R4U6 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC23.67■■□□□ 1.38
Top1mtQ8R4U6 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC23.67■■□□□ 1.38
Top1mtQ8R4U6 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Top1mtQ8R4U6 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC23.67■■□□□ 1.38
Top1mtQ8R4U6 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Top1mtQ8R4U6 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Top1mtQ8R4U6 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
Top1mtQ8R4U6 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC23.66■■□□□ 1.38
Top1mtQ8R4U6 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC23.66■■□□□ 1.38
Top1mtQ8R4U6 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Top1mtQ8R4U6 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC23.66■■□□□ 1.38
Top1mtQ8R4U6 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
Top1mtQ8R4U6 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
Top1mtQ8R4U6 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Top1mtQ8R4U6 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Top1mtQ8R4U6 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
Top1mtQ8R4U6 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Top1mtQ8R4U6 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Top1mtQ8R4U6 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
Top1mtQ8R4U6 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Top1mtQ8R4U6 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC23.65■■□□□ 1.38
Top1mtQ8R4U6 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Top1mtQ8R4U6 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms