Protein–RNA interactions for Protein: Q8R3P9

Slf1, SMC5-SMC6 complex localization factor protein 1, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slf1Q8R3P9 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Slf1Q8R3P9 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Slf1Q8R3P9 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Slf1Q8R3P9 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC19.94■□□□□ 0.78
Slf1Q8R3P9 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Slf1Q8R3P9 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Slf1Q8R3P9 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Slf1Q8R3P9 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Slf1Q8R3P9 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Slf1Q8R3P9 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Slf1Q8R3P9 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Slf1Q8R3P9 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Slf1Q8R3P9 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Slf1Q8R3P9 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Slf1Q8R3P9 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Slf1Q8R3P9 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Slf1Q8R3P9 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Slf1Q8R3P9 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Slf1Q8R3P9 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Slf1Q8R3P9 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Slf1Q8R3P9 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Slf1Q8R3P9 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC19.93■□□□□ 0.78
Slf1Q8R3P9 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Slf1Q8R3P9 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Slf1Q8R3P9 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC19.93■□□□□ 0.78
Slf1Q8R3P9 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Slf1Q8R3P9 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Slf1Q8R3P9 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Slf1Q8R3P9 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Slf1Q8R3P9 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Slf1Q8R3P9 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Slf1Q8R3P9 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Slf1Q8R3P9 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC19.92■□□□□ 0.78
Slf1Q8R3P9 Nsd1-203ENSMUST00000224156 1149 ntBASIC19.92■□□□□ 0.78
Slf1Q8R3P9 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Slf1Q8R3P9 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Slf1Q8R3P9 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Slf1Q8R3P9 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC19.92■□□□□ 0.78
Slf1Q8R3P9 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.92■□□□□ 0.78
Slf1Q8R3P9 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Slf1Q8R3P9 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.92■□□□□ 0.78
Slf1Q8R3P9 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Slf1Q8R3P9 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Slf1Q8R3P9 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Slf1Q8R3P9 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Slf1Q8R3P9 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Slf1Q8R3P9 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC19.91■□□□□ 0.78
Slf1Q8R3P9 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC19.91■□□□□ 0.78
Slf1Q8R3P9 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Slf1Q8R3P9 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
Slf1Q8R3P9 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Slf1Q8R3P9 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Slf1Q8R3P9 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Slf1Q8R3P9 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Slf1Q8R3P9 Gm43231-201ENSMUST00000202960 2258 ntBASIC19.9■□□□□ 0.78
Slf1Q8R3P9 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Slf1Q8R3P9 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC19.9■□□□□ 0.78
Slf1Q8R3P9 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Slf1Q8R3P9 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC19.9■□□□□ 0.78
Slf1Q8R3P9 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Slf1Q8R3P9 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Slf1Q8R3P9 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Slf1Q8R3P9 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Slf1Q8R3P9 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Slf1Q8R3P9 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Slf1Q8R3P9 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Slf1Q8R3P9 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Slf1Q8R3P9 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Slf1Q8R3P9 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.89■□□□□ 0.77
Slf1Q8R3P9 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC19.89■□□□□ 0.77
Slf1Q8R3P9 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Slf1Q8R3P9 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Slf1Q8R3P9 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Slf1Q8R3P9 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC19.89■□□□□ 0.77
Slf1Q8R3P9 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Slf1Q8R3P9 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Slf1Q8R3P9 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Slf1Q8R3P9 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Slf1Q8R3P9 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Slf1Q8R3P9 Gm28536-201ENSMUST00000190971 1317 ntBASIC19.88■□□□□ 0.77
Slf1Q8R3P9 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC19.88■□□□□ 0.77
Slf1Q8R3P9 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC19.88■□□□□ 0.77
Slf1Q8R3P9 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Slf1Q8R3P9 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC19.88■□□□□ 0.77
Slf1Q8R3P9 Gm42900-201ENSMUST00000197184 2167 ntBASIC19.88■□□□□ 0.77
Slf1Q8R3P9 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Slf1Q8R3P9 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Slf1Q8R3P9 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Slf1Q8R3P9 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
Slf1Q8R3P9 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Slf1Q8R3P9 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Slf1Q8R3P9 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Slf1Q8R3P9 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Slf1Q8R3P9 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC19.87■□□□□ 0.77
Slf1Q8R3P9 Gm45444-201ENSMUST00000211394 898 ntBASIC19.87■□□□□ 0.77
Slf1Q8R3P9 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Slf1Q8R3P9 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Slf1Q8R3P9 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Slf1Q8R3P9 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Slf1Q8R3P9 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms