Protein–RNA interactions for Protein: Q8R2N0

Ccdc59, Thyroid transcription factor 1-associated protein 26, mousemouse

Known RBP Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc59Q8R2N0 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccdc59Q8R2N0 Etf1-202ENSMUST00000180351 108 ntBASIC18.67■□□□□ 0.58
Ccdc59Q8R2N0 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccdc59Q8R2N0 Gm9959-201ENSMUST00000068277 390 ntBASIC18.67■□□□□ 0.58
Ccdc59Q8R2N0 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccdc59Q8R2N0 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccdc59Q8R2N0 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccdc59Q8R2N0 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccdc59Q8R2N0 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccdc59Q8R2N0 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccdc59Q8R2N0 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Ccdc59Q8R2N0 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccdc59Q8R2N0 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc59Q8R2N0 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc59Q8R2N0 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc59Q8R2N0 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc59Q8R2N0 Gm11847-201ENSMUST00000125165 1119 ntBASIC18.66■□□□□ 0.58
Ccdc59Q8R2N0 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
Ccdc59Q8R2N0 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc59Q8R2N0 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc59Q8R2N0 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc59Q8R2N0 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc59Q8R2N0 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc59Q8R2N0 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc59Q8R2N0 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc59Q8R2N0 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Ccdc59Q8R2N0 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Ccdc59Q8R2N0 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc59Q8R2N0 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc59Q8R2N0 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc59Q8R2N0 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc59Q8R2N0 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc59Q8R2N0 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc59Q8R2N0 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC18.65■□□□□ 0.58
Ccdc59Q8R2N0 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc59Q8R2N0 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Ccdc59Q8R2N0 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
Ccdc59Q8R2N0 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc59Q8R2N0 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Ccdc59Q8R2N0 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Ccdc59Q8R2N0 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Ccdc59Q8R2N0 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.58
Ccdc59Q8R2N0 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
Ccdc59Q8R2N0 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.64■□□□□ 0.57
Ccdc59Q8R2N0 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc59Q8R2N0 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC18.64■□□□□ 0.57
Ccdc59Q8R2N0 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc59Q8R2N0 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Ccdc59Q8R2N0 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc59Q8R2N0 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc59Q8R2N0 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Ccdc59Q8R2N0 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc59Q8R2N0 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc59Q8R2N0 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC18.63■□□□□ 0.57
Ccdc59Q8R2N0 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc59Q8R2N0 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc59Q8R2N0 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC18.63■□□□□ 0.57
Ccdc59Q8R2N0 Nsd1-206ENSMUST00000224918 1001 ntBASIC18.63■□□□□ 0.57
Ccdc59Q8R2N0 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
Ccdc59Q8R2N0 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc59Q8R2N0 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Ccdc59Q8R2N0 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc59Q8R2N0 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc59Q8R2N0 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc59Q8R2N0 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc59Q8R2N0 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC18.62■□□□□ 0.57
Ccdc59Q8R2N0 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc59Q8R2N0 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc59Q8R2N0 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Ccdc59Q8R2N0 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc59Q8R2N0 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.62■□□□□ 0.57
Ccdc59Q8R2N0 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.62■□□□□ 0.57
Ccdc59Q8R2N0 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
Ccdc59Q8R2N0 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Ccdc59Q8R2N0 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc59Q8R2N0 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc59Q8R2N0 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc59Q8R2N0 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc59Q8R2N0 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc59Q8R2N0 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc59Q8R2N0 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc59Q8R2N0 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc59Q8R2N0 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc59Q8R2N0 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc59Q8R2N0 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc59Q8R2N0 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc59Q8R2N0 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC18.6■□□□□ 0.57
Ccdc59Q8R2N0 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Ccdc59Q8R2N0 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc59Q8R2N0 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc59Q8R2N0 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.6■□□□□ 0.57
Ccdc59Q8R2N0 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc59Q8R2N0 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.6■□□□□ 0.57
Ccdc59Q8R2N0 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ccdc59Q8R2N0 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ccdc59Q8R2N0 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.59■□□□□ 0.57
Ccdc59Q8R2N0 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ccdc59Q8R2N0 Gm7417-201ENSMUST00000192950 473 ntBASIC18.59■□□□□ 0.57
Ccdc59Q8R2N0 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC18.59■□□□□ 0.57
Ccdc59Q8R2N0 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms