Protein–RNA interactions for Protein: Q8R1C3

Vopp1, Vesicular, overexpressed in cancer, prosurvival protein 1, mousemouse

Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vopp1Q8R1C3 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC21.4■■□□□ 1.02
Vopp1Q8R1C3 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Vopp1Q8R1C3 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC21.4■■□□□ 1.02
Vopp1Q8R1C3 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
Vopp1Q8R1C3 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Vopp1Q8R1C3 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Vopp1Q8R1C3 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.02
Vopp1Q8R1C3 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Vopp1Q8R1C3 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
Vopp1Q8R1C3 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Vopp1Q8R1C3 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
Vopp1Q8R1C3 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC21.39■■□□□ 1.01
Vopp1Q8R1C3 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
Vopp1Q8R1C3 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Vopp1Q8R1C3 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Vopp1Q8R1C3 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Vopp1Q8R1C3 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC21.38■■□□□ 1.01
Vopp1Q8R1C3 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC21.38■■□□□ 1.01
Vopp1Q8R1C3 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
Vopp1Q8R1C3 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Vopp1Q8R1C3 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Vopp1Q8R1C3 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Vopp1Q8R1C3 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Vopp1Q8R1C3 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC21.37■■□□□ 1.01
Vopp1Q8R1C3 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Vopp1Q8R1C3 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Vopp1Q8R1C3 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC21.37■■□□□ 1.01
Vopp1Q8R1C3 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
Vopp1Q8R1C3 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
Vopp1Q8R1C3 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Vopp1Q8R1C3 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Vopp1Q8R1C3 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Vopp1Q8R1C3 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Vopp1Q8R1C3 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Vopp1Q8R1C3 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC21.36■■□□□ 1.01
Vopp1Q8R1C3 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC21.36■■□□□ 1.01
Vopp1Q8R1C3 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC21.36■■□□□ 1.01
Vopp1Q8R1C3 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Vopp1Q8R1C3 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Vopp1Q8R1C3 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Vopp1Q8R1C3 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Vopp1Q8R1C3 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Vopp1Q8R1C3 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Vopp1Q8R1C3 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Vopp1Q8R1C3 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Vopp1Q8R1C3 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Vopp1Q8R1C3 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Vopp1Q8R1C3 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Vopp1Q8R1C3 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC21.35■■□□□ 1.01
Vopp1Q8R1C3 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Vopp1Q8R1C3 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
Vopp1Q8R1C3 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Vopp1Q8R1C3 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Vopp1Q8R1C3 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Vopp1Q8R1C3 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Vopp1Q8R1C3 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Vopp1Q8R1C3 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Vopp1Q8R1C3 Gm27801-201ENSMUST00000184174 223 ntBASIC21.35■■□□□ 1.01
Vopp1Q8R1C3 Gm5297-201ENSMUST00000198555 1171 ntBASIC21.35■■□□□ 1.01
Vopp1Q8R1C3 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
Vopp1Q8R1C3 Reep4-203ENSMUST00000226563 1444 ntBASIC21.35■■□□□ 1.01
Vopp1Q8R1C3 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Vopp1Q8R1C3 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Vopp1Q8R1C3 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Vopp1Q8R1C3 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Vopp1Q8R1C3 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Vopp1Q8R1C3 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC21.34■■□□□ 1.01
Vopp1Q8R1C3 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC21.34■■□□□ 1.01
Vopp1Q8R1C3 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Vopp1Q8R1C3 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Vopp1Q8R1C3 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Vopp1Q8R1C3 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Vopp1Q8R1C3 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC21.33■■□□□ 1.01
Vopp1Q8R1C3 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Vopp1Q8R1C3 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
Vopp1Q8R1C3 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Vopp1Q8R1C3 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Vopp1Q8R1C3 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Vopp1Q8R1C3 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Vopp1Q8R1C3 CT030146.1-201ENSMUST00000220919 217 ntBASIC21.33■■□□□ 1.01
Vopp1Q8R1C3 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Vopp1Q8R1C3 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Vopp1Q8R1C3 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC21.32■■□□□ 1
Vopp1Q8R1C3 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC21.32■■□□□ 1
Vopp1Q8R1C3 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC21.32■■□□□ 1
Vopp1Q8R1C3 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Vopp1Q8R1C3 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Vopp1Q8R1C3 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC21.32■■□□□ 1
Vopp1Q8R1C3 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Vopp1Q8R1C3 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC21.32■■□□□ 1
Vopp1Q8R1C3 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC21.31■■□□□ 1
Vopp1Q8R1C3 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Vopp1Q8R1C3 Gm10571-201ENSMUST00000097869 1638 ntBASIC21.31■■□□□ 1
Vopp1Q8R1C3 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC21.31■■□□□ 1
Vopp1Q8R1C3 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC21.31■■□□□ 1
Vopp1Q8R1C3 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
Vopp1Q8R1C3 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC21.31■■□□□ 1
Vopp1Q8R1C3 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC21.31■■□□□ 1
Vopp1Q8R1C3 Gm18671-201ENSMUST00000214826 683 ntBASIC21.31■■□□□ 1
Vopp1Q8R1C3 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms