Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC24.25■■□□□ 1.47
Sf3a1Q8K4Z5 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Sf3a1Q8K4Z5 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Sf3a1Q8K4Z5 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC24.25■■□□□ 1.47
Sf3a1Q8K4Z5 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Sf3a1Q8K4Z5 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC24.25■■□□□ 1.47
Sf3a1Q8K4Z5 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Sf3a1Q8K4Z5 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Sf3a1Q8K4Z5 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC24.24■■□□□ 1.47
Sf3a1Q8K4Z5 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC24.24■■□□□ 1.47
Sf3a1Q8K4Z5 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Sf3a1Q8K4Z5 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Sf3a1Q8K4Z5 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Sf3a1Q8K4Z5 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC24.24■■□□□ 1.47
Sf3a1Q8K4Z5 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC24.24■■□□□ 1.47
Sf3a1Q8K4Z5 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC24.23■■□□□ 1.47
Sf3a1Q8K4Z5 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC24.23■■□□□ 1.47
Sf3a1Q8K4Z5 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Sf3a1Q8K4Z5 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Sf3a1Q8K4Z5 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC24.23■■□□□ 1.47
Sf3a1Q8K4Z5 Mir7075-201ENSMUST00000184187 82 ntBASIC24.23■■□□□ 1.47
Sf3a1Q8K4Z5 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Sf3a1Q8K4Z5 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC24.23■■□□□ 1.47
Sf3a1Q8K4Z5 Gm10209-201ENSMUST00000203397 1607 ntBASIC24.23■■□□□ 1.47
Sf3a1Q8K4Z5 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Sf3a1Q8K4Z5 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Sf3a1Q8K4Z5 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Sf3a1Q8K4Z5 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Sf3a1Q8K4Z5 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Sf3a1Q8K4Z5 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
Sf3a1Q8K4Z5 Gm12251-201ENSMUST00000117893 792 ntBASIC24.22■■□□□ 1.47
Sf3a1Q8K4Z5 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Sf3a1Q8K4Z5 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC24.22■■□□□ 1.47
Sf3a1Q8K4Z5 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Sf3a1Q8K4Z5 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC24.21■■□□□ 1.47
Sf3a1Q8K4Z5 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Sf3a1Q8K4Z5 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Sf3a1Q8K4Z5 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC24.21■■□□□ 1.47
Sf3a1Q8K4Z5 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC24.21■■□□□ 1.47
Sf3a1Q8K4Z5 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Sf3a1Q8K4Z5 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC24.2■■□□□ 1.47
Sf3a1Q8K4Z5 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC24.2■■□□□ 1.47
Sf3a1Q8K4Z5 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC24.2■■□□□ 1.47
Sf3a1Q8K4Z5 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC24.2■■□□□ 1.46
Sf3a1Q8K4Z5 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC24.2■■□□□ 1.46
Sf3a1Q8K4Z5 Spcs1-204ENSMUST00000226782 949 ntBASIC24.2■■□□□ 1.46
Sf3a1Q8K4Z5 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC24.2■■□□□ 1.46
Sf3a1Q8K4Z5 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC24.2■■□□□ 1.46
Sf3a1Q8K4Z5 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC24.2■■□□□ 1.46
Sf3a1Q8K4Z5 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC24.2■■□□□ 1.46
Sf3a1Q8K4Z5 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC24.2■■□□□ 1.46
Sf3a1Q8K4Z5 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC24.2■■□□□ 1.46
Sf3a1Q8K4Z5 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
Sf3a1Q8K4Z5 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC24.2■■□□□ 1.46
Sf3a1Q8K4Z5 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Sf3a1Q8K4Z5 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Sf3a1Q8K4Z5 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC24.19■■□□□ 1.46
Sf3a1Q8K4Z5 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Sf3a1Q8K4Z5 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC24.19■■□□□ 1.46
Sf3a1Q8K4Z5 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC24.19■■□□□ 1.46
Sf3a1Q8K4Z5 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Sf3a1Q8K4Z5 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC24.19■■□□□ 1.46
Sf3a1Q8K4Z5 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC24.19■■□□□ 1.46
Sf3a1Q8K4Z5 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Sf3a1Q8K4Z5 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC24.18■■□□□ 1.46
Sf3a1Q8K4Z5 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Sf3a1Q8K4Z5 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Sf3a1Q8K4Z5 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Sf3a1Q8K4Z5 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Sf3a1Q8K4Z5 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Sf3a1Q8K4Z5 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC24.18■■□□□ 1.46
Sf3a1Q8K4Z5 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC24.18■■□□□ 1.46
Sf3a1Q8K4Z5 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Sf3a1Q8K4Z5 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC24.17■■□□□ 1.46
Sf3a1Q8K4Z5 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Sf3a1Q8K4Z5 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC24.17■■□□□ 1.46
Sf3a1Q8K4Z5 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC24.17■■□□□ 1.46
Sf3a1Q8K4Z5 Gm7160-202ENSMUST00000188519 1027 ntBASIC24.17■■□□□ 1.46
Sf3a1Q8K4Z5 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC24.17■■□□□ 1.46
Sf3a1Q8K4Z5 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Sf3a1Q8K4Z5 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Sf3a1Q8K4Z5 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC24.17■■□□□ 1.46
Sf3a1Q8K4Z5 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Sf3a1Q8K4Z5 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC24.17■■□□□ 1.46
Sf3a1Q8K4Z5 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Sf3a1Q8K4Z5 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
Sf3a1Q8K4Z5 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Sf3a1Q8K4Z5 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Sf3a1Q8K4Z5 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Sf3a1Q8K4Z5 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC24.16■■□□□ 1.46
Sf3a1Q8K4Z5 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC24.16■■□□□ 1.46
Sf3a1Q8K4Z5 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Sf3a1Q8K4Z5 Gm6139-201ENSMUST00000079261 882 ntBASIC24.16■■□□□ 1.46
Sf3a1Q8K4Z5 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Sf3a1Q8K4Z5 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Sf3a1Q8K4Z5 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC24.15■■□□□ 1.46
Sf3a1Q8K4Z5 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Sf3a1Q8K4Z5 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Sf3a1Q8K4Z5 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Sf3a1Q8K4Z5 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms