Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Clrn1Q8K445 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Clrn1Q8K445 AC140930.3-201ENSMUST00000222935 274 ntBASIC18.69■□□□□ 0.58
Clrn1Q8K445 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Clrn1Q8K445 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Clrn1Q8K445 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Clrn1Q8K445 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Clrn1Q8K445 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Clrn1Q8K445 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Clrn1Q8K445 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Clrn1Q8K445 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Clrn1Q8K445 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Clrn1Q8K445 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.68■□□□□ 0.58
Clrn1Q8K445 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC18.68■□□□□ 0.58
Clrn1Q8K445 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Clrn1Q8K445 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Clrn1Q8K445 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Clrn1Q8K445 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Clrn1Q8K445 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC18.67■□□□□ 0.58
Clrn1Q8K445 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Clrn1Q8K445 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Clrn1Q8K445 Gm43034-201ENSMUST00000198678 1364 ntBASIC18.67■□□□□ 0.58
Clrn1Q8K445 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Clrn1Q8K445 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Clrn1Q8K445 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Clrn1Q8K445 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Clrn1Q8K445 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Clrn1Q8K445 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC18.66■□□□□ 0.58
Clrn1Q8K445 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Clrn1Q8K445 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Clrn1Q8K445 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Clrn1Q8K445 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Clrn1Q8K445 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Clrn1Q8K445 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Clrn1Q8K445 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
Clrn1Q8K445 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
Clrn1Q8K445 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Clrn1Q8K445 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Clrn1Q8K445 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Clrn1Q8K445 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Clrn1Q8K445 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Clrn1Q8K445 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Clrn1Q8K445 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Clrn1Q8K445 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Clrn1Q8K445 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Clrn1Q8K445 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Clrn1Q8K445 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.65■□□□□ 0.58
Clrn1Q8K445 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Clrn1Q8K445 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
Clrn1Q8K445 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Clrn1Q8K445 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Clrn1Q8K445 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Clrn1Q8K445 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Clrn1Q8K445 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Clrn1Q8K445 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Clrn1Q8K445 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Clrn1Q8K445 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Clrn1Q8K445 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Clrn1Q8K445 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC18.63■□□□□ 0.57
Clrn1Q8K445 Gm21956-201ENSMUST00000179946 522 ntBASIC18.63■□□□□ 0.57
Clrn1Q8K445 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Clrn1Q8K445 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Clrn1Q8K445 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Clrn1Q8K445 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC18.63■□□□□ 0.57
Clrn1Q8K445 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Clrn1Q8K445 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Clrn1Q8K445 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Clrn1Q8K445 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Clrn1Q8K445 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Clrn1Q8K445 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC18.62■□□□□ 0.57
Clrn1Q8K445 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Clrn1Q8K445 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC18.62■□□□□ 0.57
Clrn1Q8K445 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC18.62■□□□□ 0.57
Clrn1Q8K445 Gm27045-201ENSMUST00000182145 1402 ntBASIC18.62■□□□□ 0.57
Clrn1Q8K445 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Clrn1Q8K445 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Clrn1Q8K445 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Clrn1Q8K445 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.62■□□□□ 0.57
Clrn1Q8K445 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Clrn1Q8K445 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Clrn1Q8K445 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Clrn1Q8K445 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Clrn1Q8K445 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
Clrn1Q8K445 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Clrn1Q8K445 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Clrn1Q8K445 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
Clrn1Q8K445 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Clrn1Q8K445 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Clrn1Q8K445 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Clrn1Q8K445 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Clrn1Q8K445 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Clrn1Q8K445 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Clrn1Q8K445 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC18.61■□□□□ 0.57
Clrn1Q8K445 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Clrn1Q8K445 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Clrn1Q8K445 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.6■□□□□ 0.57
Clrn1Q8K445 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Clrn1Q8K445 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Clrn1Q8K445 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Clrn1Q8K445 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms