Protein–RNA interactions for Protein: Q8K0S5

Rtn4rl1, Reticulon-4 receptor-like 1, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4rl1Q8K0S5 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rtn4rl1Q8K0S5 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rtn4rl1Q8K0S5 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rtn4rl1Q8K0S5 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rtn4rl1Q8K0S5 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.25■□□□□ 0.83
Rtn4rl1Q8K0S5 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC20.24■□□□□ 0.83
Rtn4rl1Q8K0S5 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rtn4rl1Q8K0S5 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rtn4rl1Q8K0S5 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Rtn4rl1Q8K0S5 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rtn4rl1Q8K0S5 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rtn4rl1Q8K0S5 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Rtn4rl1Q8K0S5 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rtn4rl1Q8K0S5 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rtn4rl1Q8K0S5 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rtn4rl1Q8K0S5 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC20.23■□□□□ 0.83
Rtn4rl1Q8K0S5 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rtn4rl1Q8K0S5 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rtn4rl1Q8K0S5 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rtn4rl1Q8K0S5 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rtn4rl1Q8K0S5 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rtn4rl1Q8K0S5 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC20.23■□□□□ 0.83
Rtn4rl1Q8K0S5 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rtn4rl1Q8K0S5 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rtn4rl1Q8K0S5 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rtn4rl1Q8K0S5 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rtn4rl1Q8K0S5 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rtn4rl1Q8K0S5 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC20.22■□□□□ 0.83
Rtn4rl1Q8K0S5 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rtn4rl1Q8K0S5 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Rtn4rl1Q8K0S5 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Rtn4rl1Q8K0S5 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rtn4rl1Q8K0S5 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rtn4rl1Q8K0S5 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rtn4rl1Q8K0S5 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rtn4rl1Q8K0S5 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Rtn4rl1Q8K0S5 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC20.21■□□□□ 0.83
Rtn4rl1Q8K0S5 Gm12441-201ENSMUST00000121806 588 ntBASIC20.21■□□□□ 0.83
Rtn4rl1Q8K0S5 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC20.21■□□□□ 0.83
Rtn4rl1Q8K0S5 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Rtn4rl1Q8K0S5 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rtn4rl1Q8K0S5 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Rtn4rl1Q8K0S5 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Rtn4rl1Q8K0S5 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rtn4rl1Q8K0S5 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Rtn4rl1Q8K0S5 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.2■□□□□ 0.83
Rtn4rl1Q8K0S5 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rtn4rl1Q8K0S5 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rtn4rl1Q8K0S5 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC20.2■□□□□ 0.82
Rtn4rl1Q8K0S5 Gm42555-201ENSMUST00000199304 1039 ntBASIC20.2■□□□□ 0.82
Rtn4rl1Q8K0S5 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rtn4rl1Q8K0S5 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rtn4rl1Q8K0S5 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Rtn4rl1Q8K0S5 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Rtn4rl1Q8K0S5 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Rtn4rl1Q8K0S5 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Rtn4rl1Q8K0S5 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rtn4rl1Q8K0S5 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rtn4rl1Q8K0S5 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rtn4rl1Q8K0S5 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC20.19■□□□□ 0.82
Rtn4rl1Q8K0S5 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Rtn4rl1Q8K0S5 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Rtn4rl1Q8K0S5 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC20.19■□□□□ 0.82
Rtn4rl1Q8K0S5 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rtn4rl1Q8K0S5 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rtn4rl1Q8K0S5 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rtn4rl1Q8K0S5 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Rtn4rl1Q8K0S5 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rtn4rl1Q8K0S5 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rtn4rl1Q8K0S5 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.18■□□□□ 0.82
Rtn4rl1Q8K0S5 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rtn4rl1Q8K0S5 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rtn4rl1Q8K0S5 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rtn4rl1Q8K0S5 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rtn4rl1Q8K0S5 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Rtn4rl1Q8K0S5 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC20.18■□□□□ 0.82
Rtn4rl1Q8K0S5 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC20.18■□□□□ 0.82
Rtn4rl1Q8K0S5 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Rtn4rl1Q8K0S5 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rtn4rl1Q8K0S5 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rtn4rl1Q8K0S5 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rtn4rl1Q8K0S5 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Rtn4rl1Q8K0S5 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rtn4rl1Q8K0S5 Mir5133-201ENSMUST00000174955 77 ntBASIC20.17■□□□□ 0.82
Rtn4rl1Q8K0S5 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Rtn4rl1Q8K0S5 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC20.17■□□□□ 0.82
Rtn4rl1Q8K0S5 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Rtn4rl1Q8K0S5 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rtn4rl1Q8K0S5 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rtn4rl1Q8K0S5 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rtn4rl1Q8K0S5 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rtn4rl1Q8K0S5 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC20.16■□□□□ 0.82
Rtn4rl1Q8K0S5 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Rtn4rl1Q8K0S5 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC20.16■□□□□ 0.82
Rtn4rl1Q8K0S5 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Rtn4rl1Q8K0S5 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rtn4rl1Q8K0S5 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Rtn4rl1Q8K0S5 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Rtn4rl1Q8K0S5 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Rtn4rl1Q8K0S5 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms