Protein–RNA interactions for Protein: Q8JZS7

Hmgcll1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcll1Q8JZS7 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Hmgcll1Q8JZS7 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Hmgcll1Q8JZS7 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Hmgcll1Q8JZS7 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Hmgcll1Q8JZS7 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.52■□□□□ 0.88
Hmgcll1Q8JZS7 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Hmgcll1Q8JZS7 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Hmgcll1Q8JZS7 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Hmgcll1Q8JZS7 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Hmgcll1Q8JZS7 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Hmgcll1Q8JZS7 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
Hmgcll1Q8JZS7 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Hmgcll1Q8JZS7 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
Hmgcll1Q8JZS7 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Hmgcll1Q8JZS7 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Hmgcll1Q8JZS7 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Hmgcll1Q8JZS7 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Hmgcll1Q8JZS7 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Hmgcll1Q8JZS7 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Hmgcll1Q8JZS7 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Hmgcll1Q8JZS7 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Hmgcll1Q8JZS7 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Hmgcll1Q8JZS7 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Hmgcll1Q8JZS7 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.51■□□□□ 0.87
Hmgcll1Q8JZS7 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Hmgcll1Q8JZS7 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Hmgcll1Q8JZS7 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Hmgcll1Q8JZS7 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC20.5■□□□□ 0.87
Hmgcll1Q8JZS7 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Hmgcll1Q8JZS7 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Hmgcll1Q8JZS7 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Hmgcll1Q8JZS7 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Hmgcll1Q8JZS7 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.49■□□□□ 0.87
Hmgcll1Q8JZS7 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Hmgcll1Q8JZS7 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC20.49■□□□□ 0.87
Hmgcll1Q8JZS7 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Hmgcll1Q8JZS7 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC20.49■□□□□ 0.87
Hmgcll1Q8JZS7 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC20.49■□□□□ 0.87
Hmgcll1Q8JZS7 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Hmgcll1Q8JZS7 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Hmgcll1Q8JZS7 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Hmgcll1Q8JZS7 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Hmgcll1Q8JZS7 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Hmgcll1Q8JZS7 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Hmgcll1Q8JZS7 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Hmgcll1Q8JZS7 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC20.48■□□□□ 0.87
Hmgcll1Q8JZS7 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
Hmgcll1Q8JZS7 AC137127.1-201ENSMUST00000213466 1078 ntBASIC20.48■□□□□ 0.87
Hmgcll1Q8JZS7 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Hmgcll1Q8JZS7 Gm5874-201ENSMUST00000096101 508 ntBASIC20.48■□□□□ 0.87
Hmgcll1Q8JZS7 Gm10493-201ENSMUST00000097270 612 ntBASIC20.48■□□□□ 0.87
Hmgcll1Q8JZS7 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Hmgcll1Q8JZS7 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Hmgcll1Q8JZS7 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Hmgcll1Q8JZS7 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Hmgcll1Q8JZS7 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.48■□□□□ 0.87
Hmgcll1Q8JZS7 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Hmgcll1Q8JZS7 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20.47■□□□□ 0.87
Hmgcll1Q8JZS7 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Hmgcll1Q8JZS7 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Hmgcll1Q8JZS7 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Hmgcll1Q8JZS7 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Hmgcll1Q8JZS7 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Hmgcll1Q8JZS7 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Hmgcll1Q8JZS7 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Hmgcll1Q8JZS7 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Hmgcll1Q8JZS7 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Hmgcll1Q8JZS7 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Hmgcll1Q8JZS7 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Hmgcll1Q8JZS7 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Hmgcll1Q8JZS7 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Hmgcll1Q8JZS7 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Hmgcll1Q8JZS7 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Hmgcll1Q8JZS7 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.46■□□□□ 0.87
Hmgcll1Q8JZS7 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Hmgcll1Q8JZS7 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.46■□□□□ 0.87
Hmgcll1Q8JZS7 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Hmgcll1Q8JZS7 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Hmgcll1Q8JZS7 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20.45■□□□□ 0.86
Hmgcll1Q8JZS7 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Hmgcll1Q8JZS7 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Hmgcll1Q8JZS7 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
Hmgcll1Q8JZS7 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC20.45■□□□□ 0.86
Hmgcll1Q8JZS7 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Hmgcll1Q8JZS7 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Hmgcll1Q8JZS7 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Hmgcll1Q8JZS7 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Hmgcll1Q8JZS7 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Hmgcll1Q8JZS7 Cdkn3-203ENSMUST00000227149 1952 ntBASIC20.45■□□□□ 0.86
Hmgcll1Q8JZS7 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Hmgcll1Q8JZS7 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Hmgcll1Q8JZS7 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Hmgcll1Q8JZS7 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Hmgcll1Q8JZS7 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC20.44■□□□□ 0.86
Hmgcll1Q8JZS7 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Hmgcll1Q8JZS7 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC20.44■□□□□ 0.86
Hmgcll1Q8JZS7 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC20.44■□□□□ 0.86
Hmgcll1Q8JZS7 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Hmgcll1Q8JZS7 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Hmgcll1Q8JZS7 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms