Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Clip4Q8CI96 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Clip4Q8CI96 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Clip4Q8CI96 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Clip4Q8CI96 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Clip4Q8CI96 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC19.88■□□□□ 0.77
Clip4Q8CI96 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC19.88■□□□□ 0.77
Clip4Q8CI96 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Clip4Q8CI96 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Clip4Q8CI96 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Clip4Q8CI96 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Clip4Q8CI96 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Clip4Q8CI96 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Clip4Q8CI96 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.87■□□□□ 0.77
Clip4Q8CI96 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
Clip4Q8CI96 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Clip4Q8CI96 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Clip4Q8CI96 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Clip4Q8CI96 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Clip4Q8CI96 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Clip4Q8CI96 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC19.86■□□□□ 0.77
Clip4Q8CI96 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Clip4Q8CI96 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19.86■□□□□ 0.77
Clip4Q8CI96 AC140930.3-201ENSMUST00000222935 274 ntBASIC19.86■□□□□ 0.77
Clip4Q8CI96 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Clip4Q8CI96 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Clip4Q8CI96 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Clip4Q8CI96 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
Clip4Q8CI96 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.86■□□□□ 0.77
Clip4Q8CI96 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Clip4Q8CI96 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Clip4Q8CI96 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Clip4Q8CI96 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC19.85■□□□□ 0.77
Clip4Q8CI96 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Clip4Q8CI96 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Clip4Q8CI96 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.85■□□□□ 0.77
Clip4Q8CI96 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Clip4Q8CI96 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Clip4Q8CI96 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Clip4Q8CI96 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Clip4Q8CI96 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Clip4Q8CI96 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Clip4Q8CI96 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Clip4Q8CI96 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Clip4Q8CI96 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Clip4Q8CI96 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Clip4Q8CI96 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Clip4Q8CI96 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Clip4Q8CI96 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Clip4Q8CI96 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Clip4Q8CI96 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Clip4Q8CI96 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC19.83■□□□□ 0.77
Clip4Q8CI96 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Clip4Q8CI96 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Clip4Q8CI96 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Clip4Q8CI96 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Clip4Q8CI96 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC19.83■□□□□ 0.76
Clip4Q8CI96 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Clip4Q8CI96 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Clip4Q8CI96 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.82■□□□□ 0.76
Clip4Q8CI96 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
Clip4Q8CI96 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Clip4Q8CI96 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Clip4Q8CI96 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Clip4Q8CI96 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Clip4Q8CI96 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC19.82■□□□□ 0.76
Clip4Q8CI96 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Clip4Q8CI96 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Clip4Q8CI96 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Clip4Q8CI96 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Clip4Q8CI96 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Clip4Q8CI96 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.81■□□□□ 0.76
Clip4Q8CI96 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Clip4Q8CI96 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Clip4Q8CI96 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC19.81■□□□□ 0.76
Clip4Q8CI96 Gm10657-201ENSMUST00000193528 1031 ntBASIC19.81■□□□□ 0.76
Clip4Q8CI96 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.81■□□□□ 0.76
Clip4Q8CI96 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Clip4Q8CI96 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC19.8■□□□□ 0.76
Clip4Q8CI96 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Clip4Q8CI96 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Clip4Q8CI96 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Clip4Q8CI96 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC19.8■□□□□ 0.76
Clip4Q8CI96 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Clip4Q8CI96 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Clip4Q8CI96 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Clip4Q8CI96 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.8■□□□□ 0.76
Clip4Q8CI96 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Clip4Q8CI96 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Clip4Q8CI96 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
Clip4Q8CI96 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Clip4Q8CI96 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Clip4Q8CI96 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.79■□□□□ 0.76
Clip4Q8CI96 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
Clip4Q8CI96 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Clip4Q8CI96 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Clip4Q8CI96 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Clip4Q8CI96 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Clip4Q8CI96 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
Clip4Q8CI96 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms