Protein–RNA interactions for Protein: Q8CGV4

Rdh1, MCG140848, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh1Q8CGV4 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rdh1Q8CGV4 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Rdh1Q8CGV4 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rdh1Q8CGV4 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rdh1Q8CGV4 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.33■□□□□ 0.68
Rdh1Q8CGV4 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rdh1Q8CGV4 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rdh1Q8CGV4 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Rdh1Q8CGV4 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Rdh1Q8CGV4 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Rdh1Q8CGV4 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rdh1Q8CGV4 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
Rdh1Q8CGV4 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Rdh1Q8CGV4 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Rdh1Q8CGV4 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC19.32■□□□□ 0.68
Rdh1Q8CGV4 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rdh1Q8CGV4 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rdh1Q8CGV4 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Rdh1Q8CGV4 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Rdh1Q8CGV4 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Rdh1Q8CGV4 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rdh1Q8CGV4 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.32■□□□□ 0.68
Rdh1Q8CGV4 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rdh1Q8CGV4 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rdh1Q8CGV4 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.31■□□□□ 0.68
Rdh1Q8CGV4 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rdh1Q8CGV4 AC137127.1-201ENSMUST00000213466 1078 ntBASIC19.31■□□□□ 0.68
Rdh1Q8CGV4 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rdh1Q8CGV4 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Rdh1Q8CGV4 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC19.31■□□□□ 0.68
Rdh1Q8CGV4 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.3■□□□□ 0.68
Rdh1Q8CGV4 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Rdh1Q8CGV4 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rdh1Q8CGV4 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rdh1Q8CGV4 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rdh1Q8CGV4 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Rdh1Q8CGV4 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC19.3■□□□□ 0.68
Rdh1Q8CGV4 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC19.3■□□□□ 0.68
Rdh1Q8CGV4 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rdh1Q8CGV4 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rdh1Q8CGV4 Gm10493-201ENSMUST00000097270 612 ntBASIC19.3■□□□□ 0.68
Rdh1Q8CGV4 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Rdh1Q8CGV4 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rdh1Q8CGV4 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rdh1Q8CGV4 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Rdh1Q8CGV4 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rdh1Q8CGV4 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rdh1Q8CGV4 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.29■□□□□ 0.68
Rdh1Q8CGV4 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Rdh1Q8CGV4 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rdh1Q8CGV4 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Rdh1Q8CGV4 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Rdh1Q8CGV4 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC19.29■□□□□ 0.68
Rdh1Q8CGV4 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rdh1Q8CGV4 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rdh1Q8CGV4 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rdh1Q8CGV4 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
Rdh1Q8CGV4 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rdh1Q8CGV4 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Rdh1Q8CGV4 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Rdh1Q8CGV4 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.28■□□□□ 0.68
Rdh1Q8CGV4 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Rdh1Q8CGV4 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Rdh1Q8CGV4 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rdh1Q8CGV4 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rdh1Q8CGV4 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Rdh1Q8CGV4 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Rdh1Q8CGV4 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC19.27■□□□□ 0.68
Rdh1Q8CGV4 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC19.27■□□□□ 0.68
Rdh1Q8CGV4 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC19.27■□□□□ 0.68
Rdh1Q8CGV4 Slc35b2-207ENSMUST00000226086 850 ntBASIC19.27■□□□□ 0.68
Rdh1Q8CGV4 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rdh1Q8CGV4 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rdh1Q8CGV4 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rdh1Q8CGV4 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Rdh1Q8CGV4 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Rdh1Q8CGV4 Gm10129-202ENSMUST00000193100 1316 ntBASIC19.26■□□□□ 0.67
Rdh1Q8CGV4 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Rdh1Q8CGV4 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
Rdh1Q8CGV4 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Rdh1Q8CGV4 AC099934.2-201ENSMUST00000196389 70 ntBASIC19.26■□□□□ 0.67
Rdh1Q8CGV4 AC156953.1-201ENSMUST00000196953 70 ntBASIC19.26■□□□□ 0.67
Rdh1Q8CGV4 AC157822.2-201ENSMUST00000200291 70 ntBASIC19.26■□□□□ 0.67
Rdh1Q8CGV4 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rdh1Q8CGV4 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC19.26■□□□□ 0.67
Rdh1Q8CGV4 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rdh1Q8CGV4 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rdh1Q8CGV4 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rdh1Q8CGV4 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Rdh1Q8CGV4 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rdh1Q8CGV4 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Rdh1Q8CGV4 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rdh1Q8CGV4 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Rdh1Q8CGV4 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rdh1Q8CGV4 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Rdh1Q8CGV4 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rdh1Q8CGV4 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rdh1Q8CGV4 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Rdh1Q8CGV4 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rdh1Q8CGV4 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms