Protein–RNA interactions for Protein: Q8CG47

Smc4, Structural maintenance of chromosomes protein 4, mousemouse

Predictions only

Length 1,286 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc4Q8CG47 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Smc4Q8CG47 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC24.51■■□□□ 1.51
Smc4Q8CG47 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC24.51■■□□□ 1.51
Smc4Q8CG47 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Smc4Q8CG47 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Smc4Q8CG47 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Smc4Q8CG47 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC24.5■■□□□ 1.51
Smc4Q8CG47 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Smc4Q8CG47 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC24.5■■□□□ 1.51
Smc4Q8CG47 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC24.5■■□□□ 1.51
Smc4Q8CG47 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Smc4Q8CG47 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Smc4Q8CG47 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Smc4Q8CG47 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Smc4Q8CG47 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC24.49■■□□□ 1.51
Smc4Q8CG47 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC24.49■■□□□ 1.51
Smc4Q8CG47 Gm10493-201ENSMUST00000097270 612 ntBASIC24.49■■□□□ 1.51
Smc4Q8CG47 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Smc4Q8CG47 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Smc4Q8CG47 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
Smc4Q8CG47 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
Smc4Q8CG47 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Smc4Q8CG47 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC24.49■■□□□ 1.51
Smc4Q8CG47 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Smc4Q8CG47 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC24.48■■□□□ 1.51
Smc4Q8CG47 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
Smc4Q8CG47 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC24.48■■□□□ 1.51
Smc4Q8CG47 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC24.48■■□□□ 1.51
Smc4Q8CG47 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Smc4Q8CG47 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Smc4Q8CG47 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
Smc4Q8CG47 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
Smc4Q8CG47 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
Smc4Q8CG47 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Smc4Q8CG47 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Smc4Q8CG47 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC24.47■■□□□ 1.51
Smc4Q8CG47 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Smc4Q8CG47 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Smc4Q8CG47 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Smc4Q8CG47 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Smc4Q8CG47 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Smc4Q8CG47 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC24.47■■□□□ 1.51
Smc4Q8CG47 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC24.47■■□□□ 1.51
Smc4Q8CG47 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Smc4Q8CG47 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Smc4Q8CG47 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Smc4Q8CG47 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC24.46■■□□□ 1.51
Smc4Q8CG47 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC24.46■■□□□ 1.51
Smc4Q8CG47 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC24.46■■□□□ 1.51
Smc4Q8CG47 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC24.46■■□□□ 1.51
Smc4Q8CG47 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC24.46■■□□□ 1.51
Smc4Q8CG47 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Smc4Q8CG47 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC24.46■■□□□ 1.51
Smc4Q8CG47 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC24.46■■□□□ 1.51
Smc4Q8CG47 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Smc4Q8CG47 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Smc4Q8CG47 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC24.46■■□□□ 1.51
Smc4Q8CG47 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC24.46■■□□□ 1.51
Smc4Q8CG47 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Smc4Q8CG47 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC24.46■■□□□ 1.51
Smc4Q8CG47 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC24.45■■□□□ 1.51
Smc4Q8CG47 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.51
Smc4Q8CG47 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
Smc4Q8CG47 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
Smc4Q8CG47 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
Smc4Q8CG47 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC24.45■■□□□ 1.5
Smc4Q8CG47 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Smc4Q8CG47 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Smc4Q8CG47 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC24.45■■□□□ 1.5
Smc4Q8CG47 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
Smc4Q8CG47 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC24.44■■□□□ 1.5
Smc4Q8CG47 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC24.44■■□□□ 1.5
Smc4Q8CG47 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Smc4Q8CG47 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
Smc4Q8CG47 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Smc4Q8CG47 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC24.44■■□□□ 1.5
Smc4Q8CG47 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC24.43■■□□□ 1.5
Smc4Q8CG47 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Smc4Q8CG47 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC24.43■■□□□ 1.5
Smc4Q8CG47 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC24.43■■□□□ 1.5
Smc4Q8CG47 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC24.43■■□□□ 1.5
Smc4Q8CG47 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC24.43■■□□□ 1.5
Smc4Q8CG47 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC24.43■■□□□ 1.5
Smc4Q8CG47 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC24.42■■□□□ 1.5
Smc4Q8CG47 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC24.42■■□□□ 1.5
Smc4Q8CG47 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC24.42■■□□□ 1.5
Smc4Q8CG47 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC24.42■■□□□ 1.5
Smc4Q8CG47 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Smc4Q8CG47 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Smc4Q8CG47 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC24.41■■□□□ 1.5
Smc4Q8CG47 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Smc4Q8CG47 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Smc4Q8CG47 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC24.4■■□□□ 1.5
Smc4Q8CG47 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC24.4■■□□□ 1.5
Smc4Q8CG47 Gm20634-201ENSMUST00000090779 2956 ntBASIC24.4■■□□□ 1.5
Smc4Q8CG47 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Smc4Q8CG47 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC24.39■■□□□ 1.5
Smc4Q8CG47 Gm10571-201ENSMUST00000097869 1638 ntBASIC24.39■■□□□ 1.5
Smc4Q8CG47 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
Smc4Q8CG47 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms