Protein–RNA interactions for Protein: Q8CG47

Smc4, Structural maintenance of chromosomes protein 4, mousemouse

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc4Q8CG47 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Smc4Q8CG47 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC24.51■■□□□ 1.51
Smc4Q8CG47 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC24.51■■□□□ 1.51
Smc4Q8CG47 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Smc4Q8CG47 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Smc4Q8CG47 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Smc4Q8CG47 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC24.5■■□□□ 1.51
Smc4Q8CG47 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Smc4Q8CG47 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC24.5■■□□□ 1.51
Smc4Q8CG47 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC24.5■■□□□ 1.51
Smc4Q8CG47 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Smc4Q8CG47 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Smc4Q8CG47 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Smc4Q8CG47 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Smc4Q8CG47 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC24.49■■□□□ 1.51
Smc4Q8CG47 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC24.49■■□□□ 1.51
Smc4Q8CG47 Gm10493-201ENSMUST00000097270 612 ntBASIC24.49■■□□□ 1.51
Smc4Q8CG47 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Smc4Q8CG47 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Smc4Q8CG47 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
Smc4Q8CG47 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
Smc4Q8CG47 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Smc4Q8CG47 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC24.49■■□□□ 1.51
Smc4Q8CG47 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Smc4Q8CG47 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC24.48■■□□□ 1.51
Smc4Q8CG47 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
Smc4Q8CG47 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC24.48■■□□□ 1.51
Smc4Q8CG47 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC24.48■■□□□ 1.51
Smc4Q8CG47 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Smc4Q8CG47 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Smc4Q8CG47 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
Smc4Q8CG47 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
Smc4Q8CG47 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
Smc4Q8CG47 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Smc4Q8CG47 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Smc4Q8CG47 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC24.47■■□□□ 1.51
Smc4Q8CG47 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Smc4Q8CG47 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Smc4Q8CG47 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Smc4Q8CG47 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Smc4Q8CG47 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Smc4Q8CG47 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC24.47■■□□□ 1.51
Smc4Q8CG47 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC24.47■■□□□ 1.51
Smc4Q8CG47 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Smc4Q8CG47 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Smc4Q8CG47 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Smc4Q8CG47 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC24.46■■□□□ 1.51
Smc4Q8CG47 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC24.46■■□□□ 1.51
Smc4Q8CG47 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC24.46■■□□□ 1.51
Smc4Q8CG47 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC24.46■■□□□ 1.51
Smc4Q8CG47 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC24.46■■□□□ 1.51
Smc4Q8CG47 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Smc4Q8CG47 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC24.46■■□□□ 1.51
Smc4Q8CG47 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC24.46■■□□□ 1.51
Smc4Q8CG47 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Smc4Q8CG47 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Smc4Q8CG47 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC24.46■■□□□ 1.51
Smc4Q8CG47 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC24.46■■□□□ 1.51
Smc4Q8CG47 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Smc4Q8CG47 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC24.46■■□□□ 1.51
Smc4Q8CG47 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC24.45■■□□□ 1.51
Smc4Q8CG47 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.51
Smc4Q8CG47 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
Smc4Q8CG47 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
Smc4Q8CG47 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
Smc4Q8CG47 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC24.45■■□□□ 1.5
Smc4Q8CG47 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Smc4Q8CG47 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Smc4Q8CG47 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC24.45■■□□□ 1.5
Smc4Q8CG47 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
Smc4Q8CG47 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC24.44■■□□□ 1.5
Smc4Q8CG47 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC24.44■■□□□ 1.5
Smc4Q8CG47 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Smc4Q8CG47 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
Smc4Q8CG47 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Smc4Q8CG47 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC24.44■■□□□ 1.5
Smc4Q8CG47 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC24.43■■□□□ 1.5
Smc4Q8CG47 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Smc4Q8CG47 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC24.43■■□□□ 1.5
Smc4Q8CG47 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC24.43■■□□□ 1.5
Smc4Q8CG47 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC24.43■■□□□ 1.5
Smc4Q8CG47 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC24.43■■□□□ 1.5
Smc4Q8CG47 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC24.43■■□□□ 1.5
Smc4Q8CG47 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC24.42■■□□□ 1.5
Smc4Q8CG47 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC24.42■■□□□ 1.5
Smc4Q8CG47 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC24.42■■□□□ 1.5
Smc4Q8CG47 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC24.42■■□□□ 1.5
Smc4Q8CG47 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Smc4Q8CG47 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Smc4Q8CG47 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC24.41■■□□□ 1.5
Smc4Q8CG47 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Smc4Q8CG47 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Smc4Q8CG47 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC24.4■■□□□ 1.5
Smc4Q8CG47 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC24.4■■□□□ 1.5
Smc4Q8CG47 Gm20634-201ENSMUST00000090779 2956 ntBASIC24.4■■□□□ 1.5
Smc4Q8CG47 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Smc4Q8CG47 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC24.39■■□□□ 1.5
Smc4Q8CG47 Gm10571-201ENSMUST00000097869 1638 ntBASIC24.39■■□□□ 1.5
Smc4Q8CG47 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
Smc4Q8CG47 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms