Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Shisa4Q8CA71 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Shisa4Q8CA71 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Shisa4Q8CA71 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC23.29■■□□□ 1.32
Shisa4Q8CA71 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Shisa4Q8CA71 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC23.29■■□□□ 1.32
Shisa4Q8CA71 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Shisa4Q8CA71 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC23.29■■□□□ 1.32
Shisa4Q8CA71 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Shisa4Q8CA71 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Shisa4Q8CA71 Gm8493-201ENSMUST00000196881 489 ntBASIC23.29■■□□□ 1.32
Shisa4Q8CA71 Gm2011-201ENSMUST00000203124 1263 ntBASIC23.29■■□□□ 1.32
Shisa4Q8CA71 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC23.29■■□□□ 1.32
Shisa4Q8CA71 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Shisa4Q8CA71 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Shisa4Q8CA71 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Shisa4Q8CA71 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Shisa4Q8CA71 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Shisa4Q8CA71 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Shisa4Q8CA71 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC23.28■■□□□ 1.32
Shisa4Q8CA71 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Shisa4Q8CA71 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Shisa4Q8CA71 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Shisa4Q8CA71 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC23.28■■□□□ 1.32
Shisa4Q8CA71 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Shisa4Q8CA71 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Shisa4Q8CA71 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Shisa4Q8CA71 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC23.27■■□□□ 1.32
Shisa4Q8CA71 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Shisa4Q8CA71 Gm43017-201ENSMUST00000198296 752 ntBASIC23.27■■□□□ 1.32
Shisa4Q8CA71 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Shisa4Q8CA71 AC165080.2-201ENSMUST00000217491 1530 ntBASIC23.27■■□□□ 1.32
Shisa4Q8CA71 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Shisa4Q8CA71 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Shisa4Q8CA71 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Shisa4Q8CA71 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
Shisa4Q8CA71 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC23.26■■□□□ 1.31
Shisa4Q8CA71 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
Shisa4Q8CA71 Gm7160-202ENSMUST00000188519 1027 ntBASIC23.26■■□□□ 1.31
Shisa4Q8CA71 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
Shisa4Q8CA71 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Shisa4Q8CA71 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC23.26■■□□□ 1.31
Shisa4Q8CA71 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Shisa4Q8CA71 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Shisa4Q8CA71 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Shisa4Q8CA71 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Shisa4Q8CA71 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
Shisa4Q8CA71 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Shisa4Q8CA71 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Shisa4Q8CA71 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
Shisa4Q8CA71 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Shisa4Q8CA71 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Shisa4Q8CA71 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Shisa4Q8CA71 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Shisa4Q8CA71 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC23.23■■□□□ 1.31
Shisa4Q8CA71 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Shisa4Q8CA71 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC23.23■■□□□ 1.31
Shisa4Q8CA71 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC23.23■■□□□ 1.31
Shisa4Q8CA71 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
Shisa4Q8CA71 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
Shisa4Q8CA71 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC23.22■■□□□ 1.31
Shisa4Q8CA71 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Shisa4Q8CA71 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC23.22■■□□□ 1.31
Shisa4Q8CA71 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Shisa4Q8CA71 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Shisa4Q8CA71 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC23.22■■□□□ 1.31
Shisa4Q8CA71 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC23.22■■□□□ 1.31
Shisa4Q8CA71 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Shisa4Q8CA71 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Shisa4Q8CA71 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
Shisa4Q8CA71 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
Shisa4Q8CA71 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Shisa4Q8CA71 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Shisa4Q8CA71 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC23.21■■□□□ 1.31
Shisa4Q8CA71 Gm15043-201ENSMUST00000118843 1543 ntBASIC23.21■■□□□ 1.31
Shisa4Q8CA71 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Shisa4Q8CA71 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Shisa4Q8CA71 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Shisa4Q8CA71 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Shisa4Q8CA71 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Shisa4Q8CA71 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Shisa4Q8CA71 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Shisa4Q8CA71 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Shisa4Q8CA71 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Shisa4Q8CA71 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Shisa4Q8CA71 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Shisa4Q8CA71 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Shisa4Q8CA71 AC164629.5-201ENSMUST00000220387 632 ntBASIC23.2■■□□□ 1.3
Shisa4Q8CA71 Spcs1-207ENSMUST00000228767 1008 ntBASIC23.2■■□□□ 1.3
Shisa4Q8CA71 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Shisa4Q8CA71 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
Shisa4Q8CA71 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Shisa4Q8CA71 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC23.19■■□□□ 1.3
Shisa4Q8CA71 Smad6-203ENSMUST00000179458 273 ntBASIC23.19■■□□□ 1.3
Shisa4Q8CA71 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Shisa4Q8CA71 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Shisa4Q8CA71 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Shisa4Q8CA71 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Shisa4Q8CA71 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Shisa4Q8CA71 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC23.18■■□□□ 1.3
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms