Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Trim9Q8C7M3 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Trim9Q8C7M3 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Trim9Q8C7M3 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Trim9Q8C7M3 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC21.95■■□□□ 1.1
Trim9Q8C7M3 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC21.95■■□□□ 1.1
Trim9Q8C7M3 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Trim9Q8C7M3 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Trim9Q8C7M3 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
Trim9Q8C7M3 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC21.94■■□□□ 1.1
Trim9Q8C7M3 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Trim9Q8C7M3 Gm9207-201ENSMUST00000198773 1115 ntBASIC21.94■■□□□ 1.1
Trim9Q8C7M3 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Trim9Q8C7M3 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
Trim9Q8C7M3 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Trim9Q8C7M3 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Trim9Q8C7M3 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Trim9Q8C7M3 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Trim9Q8C7M3 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Trim9Q8C7M3 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Trim9Q8C7M3 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Trim9Q8C7M3 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC21.92■■□□□ 1.1
Trim9Q8C7M3 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Trim9Q8C7M3 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC21.92■■□□□ 1.1
Trim9Q8C7M3 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC21.92■■□□□ 1.1
Trim9Q8C7M3 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC21.92■■□□□ 1.1
Trim9Q8C7M3 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Trim9Q8C7M3 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC21.92■■□□□ 1.1
Trim9Q8C7M3 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC21.92■■□□□ 1.1
Trim9Q8C7M3 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC21.92■■□□□ 1.1
Trim9Q8C7M3 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC21.92■■□□□ 1.1
Trim9Q8C7M3 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Trim9Q8C7M3 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Trim9Q8C7M3 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
Trim9Q8C7M3 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC21.91■■□□□ 1.1
Trim9Q8C7M3 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Trim9Q8C7M3 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Trim9Q8C7M3 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC21.91■■□□□ 1.1
Trim9Q8C7M3 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Trim9Q8C7M3 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Trim9Q8C7M3 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Trim9Q8C7M3 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC21.91■■□□□ 1.1
Trim9Q8C7M3 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
Trim9Q8C7M3 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC21.91■■□□□ 1.1
Trim9Q8C7M3 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
Trim9Q8C7M3 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC21.9■■□□□ 1.1
Trim9Q8C7M3 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Trim9Q8C7M3 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
Trim9Q8C7M3 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Trim9Q8C7M3 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Trim9Q8C7M3 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Trim9Q8C7M3 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC21.9■■□□□ 1.1
Trim9Q8C7M3 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Trim9Q8C7M3 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Trim9Q8C7M3 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Trim9Q8C7M3 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC21.89■■□□□ 1.1
Trim9Q8C7M3 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC21.89■■□□□ 1.1
Trim9Q8C7M3 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Trim9Q8C7M3 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Trim9Q8C7M3 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Trim9Q8C7M3 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Trim9Q8C7M3 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Trim9Q8C7M3 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC21.89■■□□□ 1.09
Trim9Q8C7M3 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Trim9Q8C7M3 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Trim9Q8C7M3 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Trim9Q8C7M3 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
Trim9Q8C7M3 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Trim9Q8C7M3 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC21.88■■□□□ 1.09
Trim9Q8C7M3 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC21.88■■□□□ 1.09
Trim9Q8C7M3 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Trim9Q8C7M3 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC21.88■■□□□ 1.09
Trim9Q8C7M3 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Trim9Q8C7M3 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Trim9Q8C7M3 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
Trim9Q8C7M3 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
Trim9Q8C7M3 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Trim9Q8C7M3 Golph3-202ENSMUST00000226517 2359 ntBASIC21.87■■□□□ 1.09
Trim9Q8C7M3 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Trim9Q8C7M3 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Trim9Q8C7M3 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
Trim9Q8C7M3 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Trim9Q8C7M3 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Trim9Q8C7M3 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC21.87■■□□□ 1.09
Trim9Q8C7M3 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Trim9Q8C7M3 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Trim9Q8C7M3 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Trim9Q8C7M3 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC21.86■■□□□ 1.09
Trim9Q8C7M3 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Trim9Q8C7M3 Gm21956-201ENSMUST00000179946 522 ntBASIC21.86■■□□□ 1.09
Trim9Q8C7M3 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
Trim9Q8C7M3 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Trim9Q8C7M3 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Trim9Q8C7M3 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Trim9Q8C7M3 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Trim9Q8C7M3 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Trim9Q8C7M3 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC21.85■■□□□ 1.09
Trim9Q8C7M3 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Trim9Q8C7M3 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Trim9Q8C7M3 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms