Protein–RNA interactions for Protein: Q8C7E9

Cstf2t, Cleavage stimulation factor subunit 2 tau variant, mousemouse

Known RBP Predictions only

Length 632 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf2tQ8C7E9 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cstf2tQ8C7E9 Gm8520-201ENSMUST00000186517 868 ntBASIC20.27■□□□□ 0.84
Cstf2tQ8C7E9 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.27■□□□□ 0.83
Cstf2tQ8C7E9 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Cstf2tQ8C7E9 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Cstf2tQ8C7E9 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cstf2tQ8C7E9 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Cstf2tQ8C7E9 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC20.26■□□□□ 0.83
Cstf2tQ8C7E9 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cstf2tQ8C7E9 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cstf2tQ8C7E9 Gm4968-201ENSMUST00000071458 858 ntBASIC20.26■□□□□ 0.83
Cstf2tQ8C7E9 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Cstf2tQ8C7E9 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cstf2tQ8C7E9 AC166356.1-201ENSMUST00000228236 1426 ntBASIC20.26■□□□□ 0.83
Cstf2tQ8C7E9 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cstf2tQ8C7E9 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.25■□□□□ 0.83
Cstf2tQ8C7E9 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cstf2tQ8C7E9 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Cstf2tQ8C7E9 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cstf2tQ8C7E9 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC20.25■□□□□ 0.83
Cstf2tQ8C7E9 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC20.25■□□□□ 0.83
Cstf2tQ8C7E9 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Cstf2tQ8C7E9 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Cstf2tQ8C7E9 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cstf2tQ8C7E9 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.25■□□□□ 0.83
Cstf2tQ8C7E9 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cstf2tQ8C7E9 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cstf2tQ8C7E9 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cstf2tQ8C7E9 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC20.24■□□□□ 0.83
Cstf2tQ8C7E9 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC20.24■□□□□ 0.83
Cstf2tQ8C7E9 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Cstf2tQ8C7E9 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cstf2tQ8C7E9 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cstf2tQ8C7E9 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cstf2tQ8C7E9 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cstf2tQ8C7E9 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cstf2tQ8C7E9 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Cstf2tQ8C7E9 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Cstf2tQ8C7E9 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cstf2tQ8C7E9 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cstf2tQ8C7E9 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cstf2tQ8C7E9 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Cstf2tQ8C7E9 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Cstf2tQ8C7E9 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cstf2tQ8C7E9 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cstf2tQ8C7E9 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC20.23■□□□□ 0.83
Cstf2tQ8C7E9 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cstf2tQ8C7E9 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cstf2tQ8C7E9 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cstf2tQ8C7E9 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
Cstf2tQ8C7E9 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Cstf2tQ8C7E9 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Cstf2tQ8C7E9 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Cstf2tQ8C7E9 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cstf2tQ8C7E9 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cstf2tQ8C7E9 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cstf2tQ8C7E9 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cstf2tQ8C7E9 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Cstf2tQ8C7E9 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cstf2tQ8C7E9 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cstf2tQ8C7E9 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC20.21■□□□□ 0.83
Cstf2tQ8C7E9 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Cstf2tQ8C7E9 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cstf2tQ8C7E9 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cstf2tQ8C7E9 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Cstf2tQ8C7E9 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cstf2tQ8C7E9 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cstf2tQ8C7E9 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cstf2tQ8C7E9 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Cstf2tQ8C7E9 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cstf2tQ8C7E9 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC20.2■□□□□ 0.82
Cstf2tQ8C7E9 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cstf2tQ8C7E9 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cstf2tQ8C7E9 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cstf2tQ8C7E9 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cstf2tQ8C7E9 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Cstf2tQ8C7E9 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Cstf2tQ8C7E9 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cstf2tQ8C7E9 Gm13168-201ENSMUST00000121771 632 ntBASIC20.19■□□□□ 0.82
Cstf2tQ8C7E9 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cstf2tQ8C7E9 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Cstf2tQ8C7E9 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cstf2tQ8C7E9 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
Cstf2tQ8C7E9 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Cstf2tQ8C7E9 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC20.18■□□□□ 0.82
Cstf2tQ8C7E9 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cstf2tQ8C7E9 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC20.18■□□□□ 0.82
Cstf2tQ8C7E9 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Cstf2tQ8C7E9 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cstf2tQ8C7E9 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC20.17■□□□□ 0.82
Cstf2tQ8C7E9 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC20.17■□□□□ 0.82
Cstf2tQ8C7E9 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cstf2tQ8C7E9 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cstf2tQ8C7E9 Mir5133-201ENSMUST00000174955 77 ntBASIC20.17■□□□□ 0.82
Cstf2tQ8C7E9 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Cstf2tQ8C7E9 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cstf2tQ8C7E9 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cstf2tQ8C7E9 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC20.17■□□□□ 0.82
Cstf2tQ8C7E9 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Cstf2tQ8C7E9 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms