Protein–RNA interactions for Protein: Q8C6S9

Cfap54, Cilia- and flagella-associated protein 54, mousemouse

Predictions only

Length 3,106 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap54Q8C6S9 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.3■□□□□ 0.68
Cfap54Q8C6S9 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
Cfap54Q8C6S9 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Cfap54Q8C6S9 Gm20049-201ENSMUST00000219950 730 ntBASIC19.3■□□□□ 0.68
Cfap54Q8C6S9 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Cfap54Q8C6S9 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Cfap54Q8C6S9 Gm7514-201ENSMUST00000209475 934 ntBASIC19.29■□□□□ 0.68
Cfap54Q8C6S9 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Cfap54Q8C6S9 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Cfap54Q8C6S9 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Cfap54Q8C6S9 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cfap54Q8C6S9 Gm8520-201ENSMUST00000186517 868 ntBASIC19.29■□□□□ 0.68
Cfap54Q8C6S9 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
Cfap54Q8C6S9 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cfap54Q8C6S9 Gm9988-201ENSMUST00000069786 435 ntBASIC19.29■□□□□ 0.68
Cfap54Q8C6S9 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC19.29■□□□□ 0.68
Cfap54Q8C6S9 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cfap54Q8C6S9 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cfap54Q8C6S9 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cfap54Q8C6S9 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.28■□□□□ 0.68
Cfap54Q8C6S9 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.28■□□□□ 0.68
Cfap54Q8C6S9 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC19.28■□□□□ 0.68
Cfap54Q8C6S9 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cfap54Q8C6S9 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Cfap54Q8C6S9 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Cfap54Q8C6S9 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cfap54Q8C6S9 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cfap54Q8C6S9 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Cfap54Q8C6S9 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cfap54Q8C6S9 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Cfap54Q8C6S9 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Cfap54Q8C6S9 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Cfap54Q8C6S9 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.27■□□□□ 0.68
Cfap54Q8C6S9 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cfap54Q8C6S9 Gm13181-201ENSMUST00000120117 1069 ntBASIC19.27■□□□□ 0.68
Cfap54Q8C6S9 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Cfap54Q8C6S9 Gm37856-201ENSMUST00000191634 999 ntBASIC19.27■□□□□ 0.68
Cfap54Q8C6S9 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Cfap54Q8C6S9 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Cfap54Q8C6S9 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cfap54Q8C6S9 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Cfap54Q8C6S9 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Cfap54Q8C6S9 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC19.26■□□□□ 0.67
Cfap54Q8C6S9 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cfap54Q8C6S9 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cfap54Q8C6S9 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cfap54Q8C6S9 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cfap54Q8C6S9 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Cfap54Q8C6S9 Gm13168-201ENSMUST00000121771 632 ntBASIC19.26■□□□□ 0.67
Cfap54Q8C6S9 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC19.26■□□□□ 0.67
Cfap54Q8C6S9 Gm42555-201ENSMUST00000199304 1039 ntBASIC19.26■□□□□ 0.67
Cfap54Q8C6S9 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cfap54Q8C6S9 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Cfap54Q8C6S9 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC19.25■□□□□ 0.67
Cfap54Q8C6S9 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
Cfap54Q8C6S9 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cfap54Q8C6S9 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Cfap54Q8C6S9 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Cfap54Q8C6S9 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Cfap54Q8C6S9 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.24■□□□□ 0.67
Cfap54Q8C6S9 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cfap54Q8C6S9 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cfap54Q8C6S9 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Cfap54Q8C6S9 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Cfap54Q8C6S9 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cfap54Q8C6S9 Gm14281-201ENSMUST00000121700 1294 ntBASIC19.24■□□□□ 0.67
Cfap54Q8C6S9 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC19.24■□□□□ 0.67
Cfap54Q8C6S9 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cfap54Q8C6S9 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Cfap54Q8C6S9 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Cfap54Q8C6S9 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cfap54Q8C6S9 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cfap54Q8C6S9 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cfap54Q8C6S9 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cfap54Q8C6S9 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cfap54Q8C6S9 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC19.23■□□□□ 0.67
Cfap54Q8C6S9 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cfap54Q8C6S9 Gm3807-201ENSMUST00000193520 1168 ntBASIC19.23■□□□□ 0.67
Cfap54Q8C6S9 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cfap54Q8C6S9 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Cfap54Q8C6S9 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
Cfap54Q8C6S9 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC19.23■□□□□ 0.67
Cfap54Q8C6S9 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cfap54Q8C6S9 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Cfap54Q8C6S9 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cfap54Q8C6S9 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cfap54Q8C6S9 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cfap54Q8C6S9 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cfap54Q8C6S9 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC19.22■□□□□ 0.67
Cfap54Q8C6S9 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cfap54Q8C6S9 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cfap54Q8C6S9 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cfap54Q8C6S9 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Cfap54Q8C6S9 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cfap54Q8C6S9 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cfap54Q8C6S9 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC19.21■□□□□ 0.67
Cfap54Q8C6S9 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Cfap54Q8C6S9 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cfap54Q8C6S9 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cfap54Q8C6S9 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms