Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Gm12251-201ENSMUST00000117893 792 ntBASIC25.37■■□□□ 1.65
Ccdc60Q8C4J0 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Ccdc60Q8C4J0 Gm10209-201ENSMUST00000203397 1607 ntBASIC25.37■■□□□ 1.65
Ccdc60Q8C4J0 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
Ccdc60Q8C4J0 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC25.36■■□□□ 1.65
Ccdc60Q8C4J0 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Ccdc60Q8C4J0 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC25.36■■□□□ 1.65
Ccdc60Q8C4J0 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC25.36■■□□□ 1.65
Ccdc60Q8C4J0 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Ccdc60Q8C4J0 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC25.36■■□□□ 1.65
Ccdc60Q8C4J0 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Ccdc60Q8C4J0 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC25.35■■□□□ 1.65
Ccdc60Q8C4J0 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC25.35■■□□□ 1.65
Ccdc60Q8C4J0 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Ccdc60Q8C4J0 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
Ccdc60Q8C4J0 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
Ccdc60Q8C4J0 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC25.34■■□□□ 1.65
Ccdc60Q8C4J0 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Ccdc60Q8C4J0 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Ccdc60Q8C4J0 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC25.34■■□□□ 1.65
Ccdc60Q8C4J0 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC25.34■■□□□ 1.65
Ccdc60Q8C4J0 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC25.34■■□□□ 1.65
Ccdc60Q8C4J0 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC25.34■■□□□ 1.65
Ccdc60Q8C4J0 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
Ccdc60Q8C4J0 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Ccdc60Q8C4J0 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC25.34■■□□□ 1.65
Ccdc60Q8C4J0 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC25.34■■□□□ 1.65
Ccdc60Q8C4J0 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Ccdc60Q8C4J0 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC25.33■■□□□ 1.65
Ccdc60Q8C4J0 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Ccdc60Q8C4J0 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
Ccdc60Q8C4J0 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC25.33■■□□□ 1.65
Ccdc60Q8C4J0 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC25.33■■□□□ 1.65
Ccdc60Q8C4J0 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC25.33■■□□□ 1.65
Ccdc60Q8C4J0 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Ccdc60Q8C4J0 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC25.32■■□□□ 1.64
Ccdc60Q8C4J0 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Ccdc60Q8C4J0 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Ccdc60Q8C4J0 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Ccdc60Q8C4J0 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Ccdc60Q8C4J0 Mir7075-201ENSMUST00000184187 82 ntBASIC25.32■■□□□ 1.64
Ccdc60Q8C4J0 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Ccdc60Q8C4J0 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Ccdc60Q8C4J0 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Ccdc60Q8C4J0 Gm43909-201ENSMUST00000203443 1876 ntBASIC25.32■■□□□ 1.64
Ccdc60Q8C4J0 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Ccdc60Q8C4J0 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC25.31■■□□□ 1.64
Ccdc60Q8C4J0 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC25.31■■□□□ 1.64
Ccdc60Q8C4J0 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Ccdc60Q8C4J0 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Ccdc60Q8C4J0 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
Ccdc60Q8C4J0 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC25.31■■□□□ 1.64
Ccdc60Q8C4J0 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC25.31■■□□□ 1.64
Ccdc60Q8C4J0 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC25.31■■□□□ 1.64
Ccdc60Q8C4J0 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC25.31■■□□□ 1.64
Ccdc60Q8C4J0 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
Ccdc60Q8C4J0 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Ccdc60Q8C4J0 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC25.3■■□□□ 1.64
Ccdc60Q8C4J0 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Ccdc60Q8C4J0 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC25.3■■□□□ 1.64
Ccdc60Q8C4J0 Spcs1-204ENSMUST00000226782 949 ntBASIC25.3■■□□□ 1.64
Ccdc60Q8C4J0 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Ccdc60Q8C4J0 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC25.3■■□□□ 1.64
Ccdc60Q8C4J0 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC25.3■■□□□ 1.64
Ccdc60Q8C4J0 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Ccdc60Q8C4J0 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Ccdc60Q8C4J0 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Ccdc60Q8C4J0 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Ccdc60Q8C4J0 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC25.29■■□□□ 1.64
Ccdc60Q8C4J0 Cdkn3-203ENSMUST00000227149 1952 ntBASIC25.29■■□□□ 1.64
Ccdc60Q8C4J0 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC25.29■■□□□ 1.64
Ccdc60Q8C4J0 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC25.29■■□□□ 1.64
Ccdc60Q8C4J0 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Ccdc60Q8C4J0 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Ccdc60Q8C4J0 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC25.29■■□□□ 1.64
Ccdc60Q8C4J0 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Ccdc60Q8C4J0 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Ccdc60Q8C4J0 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Ccdc60Q8C4J0 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC25.28■■□□□ 1.64
Ccdc60Q8C4J0 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC25.28■■□□□ 1.64
Ccdc60Q8C4J0 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
Ccdc60Q8C4J0 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Ccdc60Q8C4J0 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC25.28■■□□□ 1.64
Ccdc60Q8C4J0 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC25.28■■□□□ 1.64
Ccdc60Q8C4J0 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC25.28■■□□□ 1.64
Ccdc60Q8C4J0 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC25.28■■□□□ 1.64
Ccdc60Q8C4J0 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Ccdc60Q8C4J0 Gm15043-201ENSMUST00000118843 1543 ntBASIC25.27■■□□□ 1.64
Ccdc60Q8C4J0 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Ccdc60Q8C4J0 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Ccdc60Q8C4J0 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Ccdc60Q8C4J0 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC25.27■■□□□ 1.64
Ccdc60Q8C4J0 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC25.27■■□□□ 1.64
Ccdc60Q8C4J0 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Ccdc60Q8C4J0 Gm7160-202ENSMUST00000188519 1027 ntBASIC25.26■■□□□ 1.63
Ccdc60Q8C4J0 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC25.26■■□□□ 1.63
Ccdc60Q8C4J0 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC25.26■■□□□ 1.63
Ccdc60Q8C4J0 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC25.26■■□□□ 1.63
Ccdc60Q8C4J0 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC25.26■■□□□ 1.63
Ccdc60Q8C4J0 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms