Protein–RNA interactions for Protein: Q8C3R1

Brat1, BRCA1-associated ATM activator 1, mousemouse

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brat1Q8C3R1 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Brat1Q8C3R1 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC20.94■□□□□ 0.94
Brat1Q8C3R1 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC20.94■□□□□ 0.94
Brat1Q8C3R1 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Brat1Q8C3R1 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Brat1Q8C3R1 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Brat1Q8C3R1 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC20.93■□□□□ 0.94
Brat1Q8C3R1 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Brat1Q8C3R1 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
Brat1Q8C3R1 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC20.93■□□□□ 0.94
Brat1Q8C3R1 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Brat1Q8C3R1 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Brat1Q8C3R1 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Brat1Q8C3R1 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Brat1Q8C3R1 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Brat1Q8C3R1 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Brat1Q8C3R1 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Brat1Q8C3R1 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC20.92■□□□□ 0.94
Brat1Q8C3R1 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC20.92■□□□□ 0.94
Brat1Q8C3R1 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Brat1Q8C3R1 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Brat1Q8C3R1 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.92■□□□□ 0.94
Brat1Q8C3R1 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Brat1Q8C3R1 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Brat1Q8C3R1 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.92■□□□□ 0.94
Brat1Q8C3R1 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Brat1Q8C3R1 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.91■□□□□ 0.94
Brat1Q8C3R1 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Brat1Q8C3R1 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Brat1Q8C3R1 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC20.91■□□□□ 0.94
Brat1Q8C3R1 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Brat1Q8C3R1 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Brat1Q8C3R1 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Brat1Q8C3R1 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Brat1Q8C3R1 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20.91■□□□□ 0.94
Brat1Q8C3R1 Gm2011-201ENSMUST00000203124 1263 ntBASIC20.91■□□□□ 0.94
Brat1Q8C3R1 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Brat1Q8C3R1 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Brat1Q8C3R1 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Brat1Q8C3R1 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Brat1Q8C3R1 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.91■□□□□ 0.94
Brat1Q8C3R1 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Brat1Q8C3R1 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Brat1Q8C3R1 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Brat1Q8C3R1 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Brat1Q8C3R1 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
Brat1Q8C3R1 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Brat1Q8C3R1 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Brat1Q8C3R1 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Brat1Q8C3R1 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Brat1Q8C3R1 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC20.89■□□□□ 0.94
Brat1Q8C3R1 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.89■□□□□ 0.94
Brat1Q8C3R1 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
Brat1Q8C3R1 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Brat1Q8C3R1 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Brat1Q8C3R1 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Brat1Q8C3R1 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Brat1Q8C3R1 Smad6-203ENSMUST00000179458 273 ntBASIC20.89■□□□□ 0.93
Brat1Q8C3R1 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC20.89■□□□□ 0.93
Brat1Q8C3R1 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Brat1Q8C3R1 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Brat1Q8C3R1 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Brat1Q8C3R1 AC165080.2-201ENSMUST00000217491 1530 ntBASIC20.88■□□□□ 0.93
Brat1Q8C3R1 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Brat1Q8C3R1 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Brat1Q8C3R1 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Brat1Q8C3R1 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.88■□□□□ 0.93
Brat1Q8C3R1 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
Brat1Q8C3R1 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Brat1Q8C3R1 Gm21168-201ENSMUST00000199646 1096 ntBASIC20.88■□□□□ 0.93
Brat1Q8C3R1 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC20.88■□□□□ 0.93
Brat1Q8C3R1 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Brat1Q8C3R1 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Brat1Q8C3R1 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Brat1Q8C3R1 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Brat1Q8C3R1 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.88■□□□□ 0.93
Brat1Q8C3R1 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Brat1Q8C3R1 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.88■□□□□ 0.93
Brat1Q8C3R1 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Brat1Q8C3R1 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Brat1Q8C3R1 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
Brat1Q8C3R1 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Brat1Q8C3R1 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Brat1Q8C3R1 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Brat1Q8C3R1 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
Brat1Q8C3R1 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC20.87■□□□□ 0.93
Brat1Q8C3R1 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Brat1Q8C3R1 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Brat1Q8C3R1 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Brat1Q8C3R1 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Brat1Q8C3R1 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Brat1Q8C3R1 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Brat1Q8C3R1 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Brat1Q8C3R1 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Brat1Q8C3R1 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC20.86■□□□□ 0.93
Brat1Q8C3R1 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Brat1Q8C3R1 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Brat1Q8C3R1 Gm26833-201ENSMUST00000180899 440 ntBASIC20.86■□□□□ 0.93
Brat1Q8C3R1 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Brat1Q8C3R1 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms