Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Trerf1Q8BXJ2 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trerf1Q8BXJ2 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC20.68■□□□□ 0.9
Trerf1Q8BXJ2 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trerf1Q8BXJ2 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trerf1Q8BXJ2 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trerf1Q8BXJ2 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trerf1Q8BXJ2 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trerf1Q8BXJ2 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trerf1Q8BXJ2 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Trerf1Q8BXJ2 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Trerf1Q8BXJ2 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trerf1Q8BXJ2 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trerf1Q8BXJ2 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.67■□□□□ 0.9
Trerf1Q8BXJ2 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trerf1Q8BXJ2 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trerf1Q8BXJ2 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Trerf1Q8BXJ2 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trerf1Q8BXJ2 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trerf1Q8BXJ2 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trerf1Q8BXJ2 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Trerf1Q8BXJ2 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trerf1Q8BXJ2 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
Trerf1Q8BXJ2 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC20.66■□□□□ 0.9
Trerf1Q8BXJ2 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC20.66■□□□□ 0.9
Trerf1Q8BXJ2 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Trerf1Q8BXJ2 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC20.66■□□□□ 0.9
Trerf1Q8BXJ2 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Trerf1Q8BXJ2 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trerf1Q8BXJ2 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trerf1Q8BXJ2 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trerf1Q8BXJ2 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC20.65■□□□□ 0.9
Trerf1Q8BXJ2 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Trerf1Q8BXJ2 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trerf1Q8BXJ2 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC20.65■□□□□ 0.9
Trerf1Q8BXJ2 AC140930.3-201ENSMUST00000222935 274 ntBASIC20.65■□□□□ 0.9
Trerf1Q8BXJ2 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trerf1Q8BXJ2 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Trerf1Q8BXJ2 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trerf1Q8BXJ2 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Trerf1Q8BXJ2 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Trerf1Q8BXJ2 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC20.64■□□□□ 0.9
Trerf1Q8BXJ2 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trerf1Q8BXJ2 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trerf1Q8BXJ2 Golph3-202ENSMUST00000226517 2359 ntBASIC20.64■□□□□ 0.89
Trerf1Q8BXJ2 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trerf1Q8BXJ2 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trerf1Q8BXJ2 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trerf1Q8BXJ2 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trerf1Q8BXJ2 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Trerf1Q8BXJ2 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trerf1Q8BXJ2 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trerf1Q8BXJ2 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trerf1Q8BXJ2 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trerf1Q8BXJ2 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC20.63■□□□□ 0.89
Trerf1Q8BXJ2 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Trerf1Q8BXJ2 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trerf1Q8BXJ2 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC20.63■□□□□ 0.89
Trerf1Q8BXJ2 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trerf1Q8BXJ2 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trerf1Q8BXJ2 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC20.63■□□□□ 0.89
Trerf1Q8BXJ2 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Trerf1Q8BXJ2 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trerf1Q8BXJ2 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trerf1Q8BXJ2 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Trerf1Q8BXJ2 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trerf1Q8BXJ2 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Trerf1Q8BXJ2 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trerf1Q8BXJ2 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trerf1Q8BXJ2 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Trerf1Q8BXJ2 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trerf1Q8BXJ2 Gm15039-201ENSMUST00000118914 875 ntBASIC20.62■□□□□ 0.89
Trerf1Q8BXJ2 Krt8-ps-201ENSMUST00000208495 945 ntBASIC20.62■□□□□ 0.89
Trerf1Q8BXJ2 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trerf1Q8BXJ2 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trerf1Q8BXJ2 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Trerf1Q8BXJ2 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trerf1Q8BXJ2 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trerf1Q8BXJ2 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trerf1Q8BXJ2 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trerf1Q8BXJ2 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trerf1Q8BXJ2 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trerf1Q8BXJ2 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Trerf1Q8BXJ2 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Trerf1Q8BXJ2 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Trerf1Q8BXJ2 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trerf1Q8BXJ2 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Trerf1Q8BXJ2 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trerf1Q8BXJ2 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trerf1Q8BXJ2 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trerf1Q8BXJ2 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC20.6■□□□□ 0.89
Trerf1Q8BXJ2 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Trerf1Q8BXJ2 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Trerf1Q8BXJ2 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Trerf1Q8BXJ2 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trerf1Q8BXJ2 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trerf1Q8BXJ2 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trerf1Q8BXJ2 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Trerf1Q8BXJ2 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trerf1Q8BXJ2 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms