Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.99
Usp40Q8BWR4 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
Usp40Q8BWR4 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC27.45■■□□□ 1.98
Usp40Q8BWR4 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
Usp40Q8BWR4 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
Usp40Q8BWR4 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC27.45■■□□□ 1.98
Usp40Q8BWR4 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC27.45■■□□□ 1.98
Usp40Q8BWR4 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC27.44■■□□□ 1.98
Usp40Q8BWR4 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
Usp40Q8BWR4 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
Usp40Q8BWR4 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC27.44■■□□□ 1.98
Usp40Q8BWR4 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
Usp40Q8BWR4 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC27.44■■□□□ 1.98
Usp40Q8BWR4 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
Usp40Q8BWR4 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
Usp40Q8BWR4 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC27.43■■□□□ 1.98
Usp40Q8BWR4 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
Usp40Q8BWR4 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC27.43■■□□□ 1.98
Usp40Q8BWR4 Gm10571-201ENSMUST00000097869 1638 ntBASIC27.43■■□□□ 1.98
Usp40Q8BWR4 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
Usp40Q8BWR4 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC27.43■■□□□ 1.98
Usp40Q8BWR4 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC27.43■■□□□ 1.98
Usp40Q8BWR4 Gm27801-201ENSMUST00000184174 223 ntBASIC27.43■■□□□ 1.98
Usp40Q8BWR4 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
Usp40Q8BWR4 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC27.43■■□□□ 1.98
Usp40Q8BWR4 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
Usp40Q8BWR4 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
Usp40Q8BWR4 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC27.42■■□□□ 1.98
Usp40Q8BWR4 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
Usp40Q8BWR4 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
Usp40Q8BWR4 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC27.42■■□□□ 1.98
Usp40Q8BWR4 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC27.42■■□□□ 1.98
Usp40Q8BWR4 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC27.41■■□□□ 1.98
Usp40Q8BWR4 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
Usp40Q8BWR4 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
Usp40Q8BWR4 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
Usp40Q8BWR4 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
Usp40Q8BWR4 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
Usp40Q8BWR4 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC27.41■■□□□ 1.98
Usp40Q8BWR4 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
Usp40Q8BWR4 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
Usp40Q8BWR4 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Usp40Q8BWR4 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Usp40Q8BWR4 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC27.4■■□□□ 1.98
Usp40Q8BWR4 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC27.4■■□□□ 1.98
Usp40Q8BWR4 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC27.4■■□□□ 1.98
Usp40Q8BWR4 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC27.4■■□□□ 1.98
Usp40Q8BWR4 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC27.4■■□□□ 1.98
Usp40Q8BWR4 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC27.4■■□□□ 1.98
Usp40Q8BWR4 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Usp40Q8BWR4 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Usp40Q8BWR4 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC27.39■■□□□ 1.98
Usp40Q8BWR4 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
Usp40Q8BWR4 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC27.39■■□□□ 1.98
Usp40Q8BWR4 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC27.39■■□□□ 1.98
Usp40Q8BWR4 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
Usp40Q8BWR4 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
Usp40Q8BWR4 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC27.39■■□□□ 1.98
Usp40Q8BWR4 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
Usp40Q8BWR4 Reep4-203ENSMUST00000226563 1444 ntBASIC27.39■■□□□ 1.97
Usp40Q8BWR4 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
Usp40Q8BWR4 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Usp40Q8BWR4 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
Usp40Q8BWR4 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Usp40Q8BWR4 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC27.38■■□□□ 1.97
Usp40Q8BWR4 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC27.38■■□□□ 1.97
Usp40Q8BWR4 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
Usp40Q8BWR4 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC27.38■■□□□ 1.97
Usp40Q8BWR4 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Usp40Q8BWR4 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC27.38■■□□□ 1.97
Usp40Q8BWR4 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Usp40Q8BWR4 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
Usp40Q8BWR4 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC27.37■■□□□ 1.97
Usp40Q8BWR4 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Usp40Q8BWR4 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Usp40Q8BWR4 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Usp40Q8BWR4 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC27.36■■□□□ 1.97
Usp40Q8BWR4 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Usp40Q8BWR4 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Usp40Q8BWR4 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC27.36■■□□□ 1.97
Usp40Q8BWR4 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC27.36■■□□□ 1.97
Usp40Q8BWR4 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
Usp40Q8BWR4 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
Usp40Q8BWR4 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Usp40Q8BWR4 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
Usp40Q8BWR4 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
Usp40Q8BWR4 Gm13234-201ENSMUST00000120010 747 ntBASIC27.35■■□□□ 1.97
Usp40Q8BWR4 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC27.35■■□□□ 1.97
Usp40Q8BWR4 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Usp40Q8BWR4 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC27.35■■□□□ 1.97
Usp40Q8BWR4 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Usp40Q8BWR4 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC27.35■■□□□ 1.97
Usp40Q8BWR4 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC27.34■■□□□ 1.97
Usp40Q8BWR4 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Usp40Q8BWR4 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC27.34■■□□□ 1.97
Usp40Q8BWR4 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC27.34■■□□□ 1.97
Usp40Q8BWR4 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Usp40Q8BWR4 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Usp40Q8BWR4 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC27.34■■□□□ 1.97
Usp40Q8BWR4 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms