Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cdk5rap1Q8BTW8 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cdk5rap1Q8BTW8 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Cdk5rap1Q8BTW8 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cdk5rap1Q8BTW8 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Cdk5rap1Q8BTW8 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC18.82■□□□□ 0.6
Cdk5rap1Q8BTW8 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cdk5rap1Q8BTW8 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cdk5rap1Q8BTW8 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cdk5rap1Q8BTW8 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Cdk5rap1Q8BTW8 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
Cdk5rap1Q8BTW8 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
Cdk5rap1Q8BTW8 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Cdk5rap1Q8BTW8 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cdk5rap1Q8BTW8 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdk5rap1Q8BTW8 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdk5rap1Q8BTW8 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Cdk5rap1Q8BTW8 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cdk5rap1Q8BTW8 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC18.81■□□□□ 0.6
Cdk5rap1Q8BTW8 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdk5rap1Q8BTW8 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.81■□□□□ 0.6
Cdk5rap1Q8BTW8 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cdk5rap1Q8BTW8 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Cdk5rap1Q8BTW8 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cdk5rap1Q8BTW8 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Cdk5rap1Q8BTW8 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cdk5rap1Q8BTW8 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Cdk5rap1Q8BTW8 AC137127.1-201ENSMUST00000213466 1078 ntBASIC18.8■□□□□ 0.6
Cdk5rap1Q8BTW8 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Cdk5rap1Q8BTW8 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Cdk5rap1Q8BTW8 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cdk5rap1Q8BTW8 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cdk5rap1Q8BTW8 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cdk5rap1Q8BTW8 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Cdk5rap1Q8BTW8 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Cdk5rap1Q8BTW8 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Cdk5rap1Q8BTW8 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdk5rap1Q8BTW8 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cdk5rap1Q8BTW8 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC18.79■□□□□ 0.6
Cdk5rap1Q8BTW8 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC18.79■□□□□ 0.6
Cdk5rap1Q8BTW8 Gm10493-201ENSMUST00000097270 612 ntBASIC18.79■□□□□ 0.6
Cdk5rap1Q8BTW8 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC18.79■□□□□ 0.6
Cdk5rap1Q8BTW8 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdk5rap1Q8BTW8 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdk5rap1Q8BTW8 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
Cdk5rap1Q8BTW8 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cdk5rap1Q8BTW8 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cdk5rap1Q8BTW8 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Cdk5rap1Q8BTW8 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cdk5rap1Q8BTW8 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cdk5rap1Q8BTW8 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cdk5rap1Q8BTW8 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cdk5rap1Q8BTW8 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cdk5rap1Q8BTW8 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Cdk5rap1Q8BTW8 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cdk5rap1Q8BTW8 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cdk5rap1Q8BTW8 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cdk5rap1Q8BTW8 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cdk5rap1Q8BTW8 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Cdk5rap1Q8BTW8 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cdk5rap1Q8BTW8 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cdk5rap1Q8BTW8 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC18.77■□□□□ 0.6
Cdk5rap1Q8BTW8 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cdk5rap1Q8BTW8 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cdk5rap1Q8BTW8 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Cdk5rap1Q8BTW8 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Cdk5rap1Q8BTW8 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Cdk5rap1Q8BTW8 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Cdk5rap1Q8BTW8 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.76■□□□□ 0.59
Cdk5rap1Q8BTW8 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Cdk5rap1Q8BTW8 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Cdk5rap1Q8BTW8 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cdk5rap1Q8BTW8 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Cdk5rap1Q8BTW8 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Cdk5rap1Q8BTW8 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cdk5rap1Q8BTW8 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cdk5rap1Q8BTW8 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cdk5rap1Q8BTW8 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cdk5rap1Q8BTW8 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cdk5rap1Q8BTW8 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cdk5rap1Q8BTW8 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cdk5rap1Q8BTW8 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cdk5rap1Q8BTW8 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cdk5rap1Q8BTW8 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Cdk5rap1Q8BTW8 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC18.75■□□□□ 0.59
Cdk5rap1Q8BTW8 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC18.75■□□□□ 0.59
Cdk5rap1Q8BTW8 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cdk5rap1Q8BTW8 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cdk5rap1Q8BTW8 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cdk5rap1Q8BTW8 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Cdk5rap1Q8BTW8 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Cdk5rap1Q8BTW8 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cdk5rap1Q8BTW8 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cdk5rap1Q8BTW8 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cdk5rap1Q8BTW8 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cdk5rap1Q8BTW8 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cdk5rap1Q8BTW8 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cdk5rap1Q8BTW8 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Cdk5rap1Q8BTW8 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
Cdk5rap1Q8BTW8 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 66.3 ms