Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
Smco3Q8BQM7 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Smco3Q8BQM7 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Smco3Q8BQM7 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smco3Q8BQM7 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Smco3Q8BQM7 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Smco3Q8BQM7 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC16.32■□□□□ 0.2
Smco3Q8BQM7 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC16.32■□□□□ 0.2
Smco3Q8BQM7 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC16.32■□□□□ 0.2
Smco3Q8BQM7 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smco3Q8BQM7 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Smco3Q8BQM7 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smco3Q8BQM7 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smco3Q8BQM7 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smco3Q8BQM7 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smco3Q8BQM7 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC16.32■□□□□ 0.2
Smco3Q8BQM7 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smco3Q8BQM7 Gm37035-201ENSMUST00000194809 2148 ntBASIC16.31■□□□□ 0.2
Smco3Q8BQM7 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smco3Q8BQM7 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smco3Q8BQM7 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smco3Q8BQM7 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smco3Q8BQM7 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smco3Q8BQM7 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Smco3Q8BQM7 Gm5131-201ENSMUST00000212776 1238 ntBASIC16.31■□□□□ 0.2
Smco3Q8BQM7 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Smco3Q8BQM7 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smco3Q8BQM7 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Smco3Q8BQM7 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smco3Q8BQM7 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC16.31■□□□□ 0.2
Smco3Q8BQM7 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smco3Q8BQM7 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smco3Q8BQM7 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smco3Q8BQM7 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smco3Q8BQM7 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Smco3Q8BQM7 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smco3Q8BQM7 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smco3Q8BQM7 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smco3Q8BQM7 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC16.3■□□□□ 0.2
Smco3Q8BQM7 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC16.3■□□□□ 0.2
Smco3Q8BQM7 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Smco3Q8BQM7 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smco3Q8BQM7 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Smco3Q8BQM7 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smco3Q8BQM7 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smco3Q8BQM7 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smco3Q8BQM7 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smco3Q8BQM7 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Smco3Q8BQM7 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smco3Q8BQM7 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smco3Q8BQM7 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smco3Q8BQM7 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smco3Q8BQM7 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Smco3Q8BQM7 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Smco3Q8BQM7 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smco3Q8BQM7 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smco3Q8BQM7 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Smco3Q8BQM7 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smco3Q8BQM7 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smco3Q8BQM7 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
Smco3Q8BQM7 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smco3Q8BQM7 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Smco3Q8BQM7 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC16.28■□□□□ 0.2
Smco3Q8BQM7 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smco3Q8BQM7 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Smco3Q8BQM7 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Smco3Q8BQM7 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smco3Q8BQM7 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smco3Q8BQM7 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC16.28■□□□□ 0.2
Smco3Q8BQM7 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smco3Q8BQM7 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Smco3Q8BQM7 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC16.27■□□□□ 0.2
Smco3Q8BQM7 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Smco3Q8BQM7 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Smco3Q8BQM7 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Smco3Q8BQM7 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Smco3Q8BQM7 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Smco3Q8BQM7 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Smco3Q8BQM7 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Smco3Q8BQM7 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Smco3Q8BQM7 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Smco3Q8BQM7 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smco3Q8BQM7 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smco3Q8BQM7 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Smco3Q8BQM7 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smco3Q8BQM7 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smco3Q8BQM7 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smco3Q8BQM7 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smco3Q8BQM7 Gm10461-201ENSMUST00000202073 4786 ntBASIC16.26■□□□□ 0.19
Smco3Q8BQM7 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smco3Q8BQM7 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smco3Q8BQM7 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC16.26■□□□□ 0.19
Smco3Q8BQM7 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC16.26■□□□□ 0.19
Smco3Q8BQM7 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smco3Q8BQM7 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smco3Q8BQM7 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smco3Q8BQM7 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smco3Q8BQM7 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smco3Q8BQM7 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smco3Q8BQM7 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms