Protein–RNA interactions for Protein: Q8BLR2

Cpne4, Copine-4, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne4Q8BLR2 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cpne4Q8BLR2 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cpne4Q8BLR2 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cpne4Q8BLR2 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC17.71■□□□□ 0.43
Cpne4Q8BLR2 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Cpne4Q8BLR2 Spcs1-204ENSMUST00000226782 949 ntBASIC17.71■□□□□ 0.43
Cpne4Q8BLR2 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cpne4Q8BLR2 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cpne4Q8BLR2 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cpne4Q8BLR2 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Cpne4Q8BLR2 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC17.71■□□□□ 0.43
Cpne4Q8BLR2 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Cpne4Q8BLR2 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cpne4Q8BLR2 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Cpne4Q8BLR2 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Cpne4Q8BLR2 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cpne4Q8BLR2 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC17.7■□□□□ 0.42
Cpne4Q8BLR2 Gm6085-201ENSMUST00000182774 1470 ntBASIC17.7■□□□□ 0.42
Cpne4Q8BLR2 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cpne4Q8BLR2 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Cpne4Q8BLR2 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cpne4Q8BLR2 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Cpne4Q8BLR2 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC17.7■□□□□ 0.42
Cpne4Q8BLR2 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Cpne4Q8BLR2 Gm8493-201ENSMUST00000196881 489 ntBASIC17.7■□□□□ 0.42
Cpne4Q8BLR2 Wdr70-203ENSMUST00000227371 1130 ntBASIC17.7■□□□□ 0.42
Cpne4Q8BLR2 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cpne4Q8BLR2 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Cpne4Q8BLR2 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cpne4Q8BLR2 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cpne4Q8BLR2 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Cpne4Q8BLR2 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cpne4Q8BLR2 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC17.7■□□□□ 0.42
Cpne4Q8BLR2 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cpne4Q8BLR2 Gm10616-201ENSMUST00000205285 2127 ntBASIC17.69■□□□□ 0.42
Cpne4Q8BLR2 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cpne4Q8BLR2 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cpne4Q8BLR2 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
Cpne4Q8BLR2 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cpne4Q8BLR2 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cpne4Q8BLR2 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cpne4Q8BLR2 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cpne4Q8BLR2 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cpne4Q8BLR2 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cpne4Q8BLR2 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cpne4Q8BLR2 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cpne4Q8BLR2 Snhg20-203ENSMUST00000182811 2153 ntBASIC17.68■□□□□ 0.42
Cpne4Q8BLR2 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cpne4Q8BLR2 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cpne4Q8BLR2 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cpne4Q8BLR2 Gm6139-201ENSMUST00000079261 882 ntBASIC17.68■□□□□ 0.42
Cpne4Q8BLR2 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cpne4Q8BLR2 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cpne4Q8BLR2 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC17.67■□□□□ 0.42
Cpne4Q8BLR2 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cpne4Q8BLR2 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Cpne4Q8BLR2 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Cpne4Q8BLR2 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cpne4Q8BLR2 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cpne4Q8BLR2 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Cpne4Q8BLR2 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cpne4Q8BLR2 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cpne4Q8BLR2 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cpne4Q8BLR2 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cpne4Q8BLR2 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cpne4Q8BLR2 Gm12251-201ENSMUST00000117893 792 ntBASIC17.66■□□□□ 0.42
Cpne4Q8BLR2 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC17.66■□□□□ 0.42
Cpne4Q8BLR2 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Cpne4Q8BLR2 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC17.66■□□□□ 0.42
Cpne4Q8BLR2 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cpne4Q8BLR2 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cpne4Q8BLR2 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cpne4Q8BLR2 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Cpne4Q8BLR2 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cpne4Q8BLR2 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cpne4Q8BLR2 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Cpne4Q8BLR2 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cpne4Q8BLR2 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
Cpne4Q8BLR2 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Cpne4Q8BLR2 AC152827.1-201ENSMUST00000221143 2189 ntBASIC17.65■□□□□ 0.42
Cpne4Q8BLR2 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Cpne4Q8BLR2 Gm15039-201ENSMUST00000118914 875 ntBASIC17.65■□□□□ 0.42
Cpne4Q8BLR2 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cpne4Q8BLR2 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cpne4Q8BLR2 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cpne4Q8BLR2 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC17.65■□□□□ 0.42
Cpne4Q8BLR2 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cpne4Q8BLR2 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cpne4Q8BLR2 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Cpne4Q8BLR2 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cpne4Q8BLR2 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Cpne4Q8BLR2 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC17.64■□□□□ 0.42
Cpne4Q8BLR2 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cpne4Q8BLR2 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Cpne4Q8BLR2 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cpne4Q8BLR2 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cpne4Q8BLR2 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Cpne4Q8BLR2 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cpne4Q8BLR2 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC17.63■□□□□ 0.41
Cpne4Q8BLR2 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms