Protein–RNA interactions for Protein: Q8BLF2

Cdkl3, Cyclin-dependent kinase-like 3, mousemouse

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl3Q8BLF2 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cdkl3Q8BLF2 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cdkl3Q8BLF2 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.05■□□□□ 0.32
Cdkl3Q8BLF2 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cdkl3Q8BLF2 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cdkl3Q8BLF2 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cdkl3Q8BLF2 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Cdkl3Q8BLF2 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cdkl3Q8BLF2 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cdkl3Q8BLF2 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.04■□□□□ 0.32
Cdkl3Q8BLF2 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cdkl3Q8BLF2 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cdkl3Q8BLF2 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Cdkl3Q8BLF2 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cdkl3Q8BLF2 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cdkl3Q8BLF2 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cdkl3Q8BLF2 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cdkl3Q8BLF2 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC17.03■□□□□ 0.32
Cdkl3Q8BLF2 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cdkl3Q8BLF2 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cdkl3Q8BLF2 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cdkl3Q8BLF2 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
Cdkl3Q8BLF2 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Cdkl3Q8BLF2 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cdkl3Q8BLF2 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cdkl3Q8BLF2 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
Cdkl3Q8BLF2 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
Cdkl3Q8BLF2 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Cdkl3Q8BLF2 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cdkl3Q8BLF2 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Cdkl3Q8BLF2 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cdkl3Q8BLF2 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cdkl3Q8BLF2 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Cdkl3Q8BLF2 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cdkl3Q8BLF2 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cdkl3Q8BLF2 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
Cdkl3Q8BLF2 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Cdkl3Q8BLF2 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Cdkl3Q8BLF2 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cdkl3Q8BLF2 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cdkl3Q8BLF2 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cdkl3Q8BLF2 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cdkl3Q8BLF2 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cdkl3Q8BLF2 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Cdkl3Q8BLF2 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC17.02■□□□□ 0.32
Cdkl3Q8BLF2 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cdkl3Q8BLF2 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC17.02■□□□□ 0.32
Cdkl3Q8BLF2 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Cdkl3Q8BLF2 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
Cdkl3Q8BLF2 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
Cdkl3Q8BLF2 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cdkl3Q8BLF2 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
Cdkl3Q8BLF2 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cdkl3Q8BLF2 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Cdkl3Q8BLF2 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Cdkl3Q8BLF2 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cdkl3Q8BLF2 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Cdkl3Q8BLF2 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Cdkl3Q8BLF2 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Cdkl3Q8BLF2 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cdkl3Q8BLF2 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC17.01■□□□□ 0.31
Cdkl3Q8BLF2 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cdkl3Q8BLF2 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Cdkl3Q8BLF2 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Cdkl3Q8BLF2 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cdkl3Q8BLF2 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC17.01■□□□□ 0.31
Cdkl3Q8BLF2 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cdkl3Q8BLF2 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cdkl3Q8BLF2 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cdkl3Q8BLF2 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cdkl3Q8BLF2 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cdkl3Q8BLF2 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cdkl3Q8BLF2 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC17■□□□□ 0.31
Cdkl3Q8BLF2 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cdkl3Q8BLF2 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC17■□□□□ 0.31
Cdkl3Q8BLF2 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cdkl3Q8BLF2 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC17■□□□□ 0.31
Cdkl3Q8BLF2 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cdkl3Q8BLF2 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cdkl3Q8BLF2 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cdkl3Q8BLF2 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Cdkl3Q8BLF2 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cdkl3Q8BLF2 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC17■□□□□ 0.31
Cdkl3Q8BLF2 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cdkl3Q8BLF2 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Cdkl3Q8BLF2 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cdkl3Q8BLF2 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cdkl3Q8BLF2 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cdkl3Q8BLF2 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC16.99■□□□□ 0.31
Cdkl3Q8BLF2 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Cdkl3Q8BLF2 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cdkl3Q8BLF2 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cdkl3Q8BLF2 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Cdkl3Q8BLF2 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cdkl3Q8BLF2 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cdkl3Q8BLF2 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC16.99■□□□□ 0.31
Cdkl3Q8BLF2 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cdkl3Q8BLF2 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Cdkl3Q8BLF2 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Cdkl3Q8BLF2 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms