Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdh20Q8BIZ0 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdh20Q8BIZ0 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Pcdh20Q8BIZ0 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
Pcdh20Q8BIZ0 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdh20Q8BIZ0 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC19.27■□□□□ 0.68
Pcdh20Q8BIZ0 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdh20Q8BIZ0 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
Pcdh20Q8BIZ0 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.27■□□□□ 0.67
Pcdh20Q8BIZ0 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdh20Q8BIZ0 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdh20Q8BIZ0 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdh20Q8BIZ0 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Pcdh20Q8BIZ0 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC19.26■□□□□ 0.67
Pcdh20Q8BIZ0 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdh20Q8BIZ0 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.26■□□□□ 0.67
Pcdh20Q8BIZ0 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC19.26■□□□□ 0.67
Pcdh20Q8BIZ0 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC19.26■□□□□ 0.67
Pcdh20Q8BIZ0 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC19.26■□□□□ 0.67
Pcdh20Q8BIZ0 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdh20Q8BIZ0 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Pcdh20Q8BIZ0 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdh20Q8BIZ0 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdh20Q8BIZ0 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.25■□□□□ 0.67
Pcdh20Q8BIZ0 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.25■□□□□ 0.67
Pcdh20Q8BIZ0 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdh20Q8BIZ0 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC19.25■□□□□ 0.67
Pcdh20Q8BIZ0 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdh20Q8BIZ0 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdh20Q8BIZ0 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdh20Q8BIZ0 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdh20Q8BIZ0 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC19.24■□□□□ 0.67
Pcdh20Q8BIZ0 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Pcdh20Q8BIZ0 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdh20Q8BIZ0 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdh20Q8BIZ0 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdh20Q8BIZ0 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdh20Q8BIZ0 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.23■□□□□ 0.67
Pcdh20Q8BIZ0 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdh20Q8BIZ0 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC19.23■□□□□ 0.67
Pcdh20Q8BIZ0 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdh20Q8BIZ0 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdh20Q8BIZ0 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdh20Q8BIZ0 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdh20Q8BIZ0 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC19.22■□□□□ 0.67
Pcdh20Q8BIZ0 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdh20Q8BIZ0 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdh20Q8BIZ0 Gm43034-201ENSMUST00000198678 1364 ntBASIC19.22■□□□□ 0.67
Pcdh20Q8BIZ0 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdh20Q8BIZ0 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdh20Q8BIZ0 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Pcdh20Q8BIZ0 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC19.22■□□□□ 0.67
Pcdh20Q8BIZ0 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Pcdh20Q8BIZ0 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdh20Q8BIZ0 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdh20Q8BIZ0 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdh20Q8BIZ0 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdh20Q8BIZ0 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdh20Q8BIZ0 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdh20Q8BIZ0 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC19.21■□□□□ 0.67
Pcdh20Q8BIZ0 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdh20Q8BIZ0 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdh20Q8BIZ0 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdh20Q8BIZ0 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdh20Q8BIZ0 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdh20Q8BIZ0 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdh20Q8BIZ0 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdh20Q8BIZ0 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdh20Q8BIZ0 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdh20Q8BIZ0 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Pcdh20Q8BIZ0 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.2■□□□□ 0.66
Pcdh20Q8BIZ0 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdh20Q8BIZ0 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC19.2■□□□□ 0.66
Pcdh20Q8BIZ0 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Pcdh20Q8BIZ0 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Pcdh20Q8BIZ0 Gm9870-201ENSMUST00000063874 645 ntBASIC19.2■□□□□ 0.66
Pcdh20Q8BIZ0 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdh20Q8BIZ0 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Pcdh20Q8BIZ0 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Pcdh20Q8BIZ0 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Pcdh20Q8BIZ0 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdh20Q8BIZ0 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdh20Q8BIZ0 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdh20Q8BIZ0 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
Pcdh20Q8BIZ0 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdh20Q8BIZ0 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdh20Q8BIZ0 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdh20Q8BIZ0 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdh20Q8BIZ0 Golgb1-201ENSMUST00000023534 498 ntBASIC19.19■□□□□ 0.66
Pcdh20Q8BIZ0 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
Pcdh20Q8BIZ0 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdh20Q8BIZ0 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdh20Q8BIZ0 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdh20Q8BIZ0 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Pcdh20Q8BIZ0 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdh20Q8BIZ0 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19.18■□□□□ 0.66
Pcdh20Q8BIZ0 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdh20Q8BIZ0 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdh20Q8BIZ0 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdh20Q8BIZ0 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms