Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Depdc1bQ8BH88 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC21.49■■□□□ 1.03
Depdc1bQ8BH88 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Depdc1bQ8BH88 AC166356.1-201ENSMUST00000228236 1426 ntBASIC21.49■■□□□ 1.03
Depdc1bQ8BH88 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC21.49■■□□□ 1.03
Depdc1bQ8BH88 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Depdc1bQ8BH88 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Depdc1bQ8BH88 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
Depdc1bQ8BH88 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Depdc1bQ8BH88 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Depdc1bQ8BH88 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Depdc1bQ8BH88 Notumos-201ENSMUST00000151998 2659 ntBASIC21.49■■□□□ 1.03
Depdc1bQ8BH88 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
Depdc1bQ8BH88 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC21.48■■□□□ 1.03
Depdc1bQ8BH88 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Depdc1bQ8BH88 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
Depdc1bQ8BH88 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Depdc1bQ8BH88 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Depdc1bQ8BH88 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC21.48■■□□□ 1.03
Depdc1bQ8BH88 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Depdc1bQ8BH88 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Depdc1bQ8BH88 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Depdc1bQ8BH88 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC21.48■■□□□ 1.03
Depdc1bQ8BH88 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Depdc1bQ8BH88 Gm34220-201ENSMUST00000223001 2709 ntBASIC21.47■■□□□ 1.03
Depdc1bQ8BH88 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Depdc1bQ8BH88 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC21.47■■□□□ 1.03
Depdc1bQ8BH88 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Depdc1bQ8BH88 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Depdc1bQ8BH88 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC21.47■■□□□ 1.03
Depdc1bQ8BH88 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
Depdc1bQ8BH88 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Depdc1bQ8BH88 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Depdc1bQ8BH88 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Depdc1bQ8BH88 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Depdc1bQ8BH88 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Depdc1bQ8BH88 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC21.46■■□□□ 1.03
Depdc1bQ8BH88 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Depdc1bQ8BH88 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC21.46■■□□□ 1.03
Depdc1bQ8BH88 Serp2-204ENSMUST00000228055 705 ntBASIC21.46■■□□□ 1.03
Depdc1bQ8BH88 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Depdc1bQ8BH88 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
Depdc1bQ8BH88 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC21.46■■□□□ 1.03
Depdc1bQ8BH88 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Depdc1bQ8BH88 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Depdc1bQ8BH88 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC21.45■■□□□ 1.03
Depdc1bQ8BH88 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Depdc1bQ8BH88 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
Depdc1bQ8BH88 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
Depdc1bQ8BH88 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Depdc1bQ8BH88 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Depdc1bQ8BH88 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Depdc1bQ8BH88 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Depdc1bQ8BH88 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Depdc1bQ8BH88 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Depdc1bQ8BH88 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Depdc1bQ8BH88 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Depdc1bQ8BH88 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC21.44■■□□□ 1.02
Depdc1bQ8BH88 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC21.44■■□□□ 1.02
Depdc1bQ8BH88 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC21.44■■□□□ 1.02
Depdc1bQ8BH88 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Depdc1bQ8BH88 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Depdc1bQ8BH88 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Depdc1bQ8BH88 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC21.44■■□□□ 1.02
Depdc1bQ8BH88 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Depdc1bQ8BH88 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Depdc1bQ8BH88 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Depdc1bQ8BH88 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC21.43■■□□□ 1.02
Depdc1bQ8BH88 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC21.43■■□□□ 1.02
Depdc1bQ8BH88 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC21.43■■□□□ 1.02
Depdc1bQ8BH88 Gm10657-201ENSMUST00000193528 1031 ntBASIC21.43■■□□□ 1.02
Depdc1bQ8BH88 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Depdc1bQ8BH88 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Depdc1bQ8BH88 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Depdc1bQ8BH88 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Depdc1bQ8BH88 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Depdc1bQ8BH88 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Depdc1bQ8BH88 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Depdc1bQ8BH88 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Depdc1bQ8BH88 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Depdc1bQ8BH88 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Depdc1bQ8BH88 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC21.42■■□□□ 1.02
Depdc1bQ8BH88 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
Depdc1bQ8BH88 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Depdc1bQ8BH88 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Depdc1bQ8BH88 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Depdc1bQ8BH88 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Depdc1bQ8BH88 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Depdc1bQ8BH88 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Depdc1bQ8BH88 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Depdc1bQ8BH88 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Depdc1bQ8BH88 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Depdc1bQ8BH88 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Depdc1bQ8BH88 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Depdc1bQ8BH88 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Depdc1bQ8BH88 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Depdc1bQ8BH88 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Depdc1bQ8BH88 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Depdc1bQ8BH88 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Depdc1bQ8BH88 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 135.4 ms