Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim6Q8BGE7 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Trim6Q8BGE7 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Trim6Q8BGE7 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Trim6Q8BGE7 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Trim6Q8BGE7 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC20.97■□□□□ 0.95
Trim6Q8BGE7 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim6Q8BGE7 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim6Q8BGE7 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20.97■□□□□ 0.95
Trim6Q8BGE7 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim6Q8BGE7 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim6Q8BGE7 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim6Q8BGE7 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim6Q8BGE7 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC20.96■□□□□ 0.95
Trim6Q8BGE7 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC20.96■□□□□ 0.95
Trim6Q8BGE7 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC20.96■□□□□ 0.95
Trim6Q8BGE7 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim6Q8BGE7 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim6Q8BGE7 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim6Q8BGE7 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Trim6Q8BGE7 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Trim6Q8BGE7 Cap2-205ENSMUST00000225824 1634 ntBASIC20.96■□□□□ 0.95
Trim6Q8BGE7 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim6Q8BGE7 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim6Q8BGE7 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim6Q8BGE7 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim6Q8BGE7 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim6Q8BGE7 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.95
Trim6Q8BGE7 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Trim6Q8BGE7 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim6Q8BGE7 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim6Q8BGE7 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim6Q8BGE7 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim6Q8BGE7 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Trim6Q8BGE7 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim6Q8BGE7 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Trim6Q8BGE7 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Trim6Q8BGE7 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim6Q8BGE7 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim6Q8BGE7 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim6Q8BGE7 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC20.94■□□□□ 0.94
Trim6Q8BGE7 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim6Q8BGE7 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim6Q8BGE7 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim6Q8BGE7 Gm43566-201ENSMUST00000196851 808 ntBASIC20.94■□□□□ 0.94
Trim6Q8BGE7 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim6Q8BGE7 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim6Q8BGE7 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim6Q8BGE7 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Trim6Q8BGE7 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC20.93■□□□□ 0.94
Trim6Q8BGE7 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim6Q8BGE7 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Trim6Q8BGE7 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Trim6Q8BGE7 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim6Q8BGE7 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim6Q8BGE7 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim6Q8BGE7 Gm13238-201ENSMUST00000117655 780 ntBASIC20.92■□□□□ 0.94
Trim6Q8BGE7 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Trim6Q8BGE7 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim6Q8BGE7 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Trim6Q8BGE7 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
Trim6Q8BGE7 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim6Q8BGE7 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim6Q8BGE7 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC20.91■□□□□ 0.94
Trim6Q8BGE7 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim6Q8BGE7 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim6Q8BGE7 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim6Q8BGE7 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim6Q8BGE7 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim6Q8BGE7 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC20.9■□□□□ 0.94
Trim6Q8BGE7 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.9■□□□□ 0.94
Trim6Q8BGE7 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC20.9■□□□□ 0.94
Trim6Q8BGE7 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Trim6Q8BGE7 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Trim6Q8BGE7 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Trim6Q8BGE7 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Trim6Q8BGE7 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Trim6Q8BGE7 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Trim6Q8BGE7 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trim6Q8BGE7 Gm5921-201ENSMUST00000075898 882 ntBASIC20.89■□□□□ 0.93
Trim6Q8BGE7 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trim6Q8BGE7 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trim6Q8BGE7 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Trim6Q8BGE7 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trim6Q8BGE7 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Trim6Q8BGE7 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim6Q8BGE7 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim6Q8BGE7 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim6Q8BGE7 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim6Q8BGE7 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC20.88■□□□□ 0.93
Trim6Q8BGE7 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Trim6Q8BGE7 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim6Q8BGE7 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim6Q8BGE7 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Trim6Q8BGE7 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC20.88■□□□□ 0.93
Trim6Q8BGE7 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim6Q8BGE7 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim6Q8BGE7 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim6Q8BGE7 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim6Q8BGE7 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms