Protein–RNA interactions for Protein: Q8BFW4

Trim65, Tripartite motif-containing protein 65, mousemouse

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim65Q8BFW4 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Trim65Q8BFW4 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Trim65Q8BFW4 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Trim65Q8BFW4 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC21.28■■□□□ 1
Trim65Q8BFW4 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Trim65Q8BFW4 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC21.28■■□□□ 1
Trim65Q8BFW4 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Trim65Q8BFW4 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Trim65Q8BFW4 Gm27045-201ENSMUST00000182145 1402 ntBASIC21.28■■□□□ 1
Trim65Q8BFW4 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Trim65Q8BFW4 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Trim65Q8BFW4 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Trim65Q8BFW4 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC21.27■■□□□ 1
Trim65Q8BFW4 Gm9207-201ENSMUST00000198773 1115 ntBASIC21.27■■□□□ 1
Trim65Q8BFW4 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC21.27■■□□□ 1
Trim65Q8BFW4 Notumos-201ENSMUST00000151998 2659 ntBASIC21.27■■□□□ 1
Trim65Q8BFW4 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trim65Q8BFW4 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trim65Q8BFW4 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trim65Q8BFW4 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trim65Q8BFW4 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trim65Q8BFW4 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC21.26■□□□□ 0.99
Trim65Q8BFW4 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trim65Q8BFW4 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trim65Q8BFW4 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trim65Q8BFW4 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trim65Q8BFW4 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC21.25■□□□□ 0.99
Trim65Q8BFW4 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC21.25■□□□□ 0.99
Trim65Q8BFW4 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trim65Q8BFW4 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trim65Q8BFW4 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trim65Q8BFW4 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC21.25■□□□□ 0.99
Trim65Q8BFW4 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim65Q8BFW4 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim65Q8BFW4 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Trim65Q8BFW4 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Trim65Q8BFW4 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC21.24■□□□□ 0.99
Trim65Q8BFW4 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim65Q8BFW4 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim65Q8BFW4 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim65Q8BFW4 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Trim65Q8BFW4 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Trim65Q8BFW4 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC21.24■□□□□ 0.99
Trim65Q8BFW4 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Trim65Q8BFW4 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Trim65Q8BFW4 Cdkn3-203ENSMUST00000227149 1952 ntBASIC21.23■□□□□ 0.99
Trim65Q8BFW4 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Trim65Q8BFW4 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC21.23■□□□□ 0.99
Trim65Q8BFW4 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Trim65Q8BFW4 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trim65Q8BFW4 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trim65Q8BFW4 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trim65Q8BFW4 Gm15043-201ENSMUST00000118843 1543 ntBASIC21.23■□□□□ 0.99
Trim65Q8BFW4 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trim65Q8BFW4 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trim65Q8BFW4 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trim65Q8BFW4 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Trim65Q8BFW4 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trim65Q8BFW4 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trim65Q8BFW4 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trim65Q8BFW4 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trim65Q8BFW4 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Trim65Q8BFW4 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trim65Q8BFW4 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trim65Q8BFW4 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Trim65Q8BFW4 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trim65Q8BFW4 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC21.21■□□□□ 0.99
Trim65Q8BFW4 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC21.21■□□□□ 0.99
Trim65Q8BFW4 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Trim65Q8BFW4 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trim65Q8BFW4 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trim65Q8BFW4 Gm6085-201ENSMUST00000182774 1470 ntBASIC21.2■□□□□ 0.98
Trim65Q8BFW4 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trim65Q8BFW4 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Trim65Q8BFW4 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trim65Q8BFW4 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trim65Q8BFW4 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Trim65Q8BFW4 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC21.2■□□□□ 0.98
Trim65Q8BFW4 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Trim65Q8BFW4 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
Trim65Q8BFW4 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Trim65Q8BFW4 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC21.19■□□□□ 0.98
Trim65Q8BFW4 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC21.19■□□□□ 0.98
Trim65Q8BFW4 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
Trim65Q8BFW4 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
Trim65Q8BFW4 Gm21956-201ENSMUST00000179946 522 ntBASIC21.19■□□□□ 0.98
Trim65Q8BFW4 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trim65Q8BFW4 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trim65Q8BFW4 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trim65Q8BFW4 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trim65Q8BFW4 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC21.18■□□□□ 0.98
Trim65Q8BFW4 Gm6802-201ENSMUST00000167843 1983 ntBASIC21.18■□□□□ 0.98
Trim65Q8BFW4 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trim65Q8BFW4 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC21.18■□□□□ 0.98
Trim65Q8BFW4 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC21.18■□□□□ 0.98
Trim65Q8BFW4 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC21.18■□□□□ 0.98
Trim65Q8BFW4 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Trim65Q8BFW4 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Trim65Q8BFW4 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trim65Q8BFW4 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms