Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim50Q810I2 Gm21956-201ENSMUST00000179946 522 ntBASIC19.3■□□□□ 0.68
Trim50Q810I2 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.3■□□□□ 0.68
Trim50Q810I2 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim50Q810I2 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim50Q810I2 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.29■□□□□ 0.68
Trim50Q810I2 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Trim50Q810I2 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.29■□□□□ 0.68
Trim50Q810I2 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim50Q810I2 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim50Q810I2 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Trim50Q810I2 Gm13241-201ENSMUST00000094493 780 ntBASIC19.29■□□□□ 0.68
Trim50Q810I2 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim50Q810I2 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim50Q810I2 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Trim50Q810I2 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim50Q810I2 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim50Q810I2 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Trim50Q810I2 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim50Q810I2 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Trim50Q810I2 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim50Q810I2 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Trim50Q810I2 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim50Q810I2 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC19.28■□□□□ 0.68
Trim50Q810I2 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC19.28■□□□□ 0.68
Trim50Q810I2 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim50Q810I2 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim50Q810I2 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim50Q810I2 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Trim50Q810I2 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC19.28■□□□□ 0.68
Trim50Q810I2 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim50Q810I2 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Trim50Q810I2 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
Trim50Q810I2 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Trim50Q810I2 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.27■□□□□ 0.67
Trim50Q810I2 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim50Q810I2 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim50Q810I2 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim50Q810I2 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim50Q810I2 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Trim50Q810I2 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim50Q810I2 AC140930.3-201ENSMUST00000222935 274 ntBASIC19.26■□□□□ 0.67
Trim50Q810I2 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim50Q810I2 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Trim50Q810I2 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.26■□□□□ 0.67
Trim50Q810I2 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Trim50Q810I2 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Trim50Q810I2 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim50Q810I2 Gm27045-201ENSMUST00000182145 1402 ntBASIC19.25■□□□□ 0.67
Trim50Q810I2 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Trim50Q810I2 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trim50Q810I2 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim50Q810I2 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim50Q810I2 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim50Q810I2 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.25■□□□□ 0.67
Trim50Q810I2 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim50Q810I2 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC19.25■□□□□ 0.67
Trim50Q810I2 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Trim50Q810I2 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim50Q810I2 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Trim50Q810I2 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim50Q810I2 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim50Q810I2 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim50Q810I2 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.24■□□□□ 0.67
Trim50Q810I2 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim50Q810I2 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim50Q810I2 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Trim50Q810I2 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim50Q810I2 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim50Q810I2 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim50Q810I2 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim50Q810I2 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim50Q810I2 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Trim50Q810I2 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Trim50Q810I2 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
Trim50Q810I2 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim50Q810I2 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Trim50Q810I2 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Trim50Q810I2 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim50Q810I2 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Trim50Q810I2 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim50Q810I2 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim50Q810I2 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Trim50Q810I2 Gm43034-201ENSMUST00000198678 1364 ntBASIC19.22■□□□□ 0.67
Trim50Q810I2 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Trim50Q810I2 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim50Q810I2 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Trim50Q810I2 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC19.22■□□□□ 0.67
Trim50Q810I2 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC19.22■□□□□ 0.67
Trim50Q810I2 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim50Q810I2 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
Trim50Q810I2 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim50Q810I2 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim50Q810I2 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Trim50Q810I2 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Trim50Q810I2 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim50Q810I2 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim50Q810I2 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Trim50Q810I2 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim50Q810I2 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms