Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Trnp1Q80ZI1 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC22.68■■□□□ 1.22
Trnp1Q80ZI1 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Trnp1Q80ZI1 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC22.68■■□□□ 1.22
Trnp1Q80ZI1 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Trnp1Q80ZI1 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Trnp1Q80ZI1 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Trnp1Q80ZI1 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Trnp1Q80ZI1 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC22.67■■□□□ 1.22
Trnp1Q80ZI1 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC22.67■■□□□ 1.22
Trnp1Q80ZI1 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC22.67■■□□□ 1.22
Trnp1Q80ZI1 Gm43859-201ENSMUST00000200075 1412 ntBASIC22.66■■□□□ 1.22
Trnp1Q80ZI1 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Trnp1Q80ZI1 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Trnp1Q80ZI1 Gm5408-201ENSMUST00000197998 747 ntBASIC22.66■■□□□ 1.22
Trnp1Q80ZI1 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Trnp1Q80ZI1 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
Trnp1Q80ZI1 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Trnp1Q80ZI1 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Trnp1Q80ZI1 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Trnp1Q80ZI1 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC22.65■■□□□ 1.22
Trnp1Q80ZI1 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Trnp1Q80ZI1 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Trnp1Q80ZI1 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
Trnp1Q80ZI1 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC22.65■■□□□ 1.22
Trnp1Q80ZI1 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Trnp1Q80ZI1 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Trnp1Q80ZI1 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC22.65■■□□□ 1.22
Trnp1Q80ZI1 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Trnp1Q80ZI1 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC22.65■■□□□ 1.22
Trnp1Q80ZI1 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
Trnp1Q80ZI1 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Trnp1Q80ZI1 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Trnp1Q80ZI1 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Trnp1Q80ZI1 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.21
Trnp1Q80ZI1 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC22.64■■□□□ 1.21
Trnp1Q80ZI1 Gm6365-201ENSMUST00000054711 744 ntBASIC22.64■■□□□ 1.21
Trnp1Q80ZI1 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Trnp1Q80ZI1 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC22.64■■□□□ 1.21
Trnp1Q80ZI1 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC22.64■■□□□ 1.21
Trnp1Q80ZI1 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Trnp1Q80ZI1 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Trnp1Q80ZI1 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC22.63■■□□□ 1.21
Trnp1Q80ZI1 Gm13168-201ENSMUST00000121771 632 ntBASIC22.63■■□□□ 1.21
Trnp1Q80ZI1 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Trnp1Q80ZI1 Gm20049-201ENSMUST00000219950 730 ntBASIC22.63■■□□□ 1.21
Trnp1Q80ZI1 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC22.63■■□□□ 1.21
Trnp1Q80ZI1 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Trnp1Q80ZI1 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
Trnp1Q80ZI1 Gm37415-201ENSMUST00000192265 2054 ntBASIC22.62■■□□□ 1.21
Trnp1Q80ZI1 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Trnp1Q80ZI1 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Trnp1Q80ZI1 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC22.62■■□□□ 1.21
Trnp1Q80ZI1 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Trnp1Q80ZI1 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
Trnp1Q80ZI1 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Trnp1Q80ZI1 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Trnp1Q80ZI1 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Trnp1Q80ZI1 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC22.61■■□□□ 1.21
Trnp1Q80ZI1 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC22.61■■□□□ 1.21
Trnp1Q80ZI1 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Trnp1Q80ZI1 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC22.61■■□□□ 1.21
Trnp1Q80ZI1 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Trnp1Q80ZI1 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Trnp1Q80ZI1 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Trnp1Q80ZI1 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC22.6■■□□□ 1.21
Trnp1Q80ZI1 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Trnp1Q80ZI1 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Trnp1Q80ZI1 CT010467.1-202ENSMUST00000205406 714 ntBASIC22.6■■□□□ 1.21
Trnp1Q80ZI1 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC22.6■■□□□ 1.21
Trnp1Q80ZI1 CT030146.1-201ENSMUST00000220919 217 ntBASIC22.6■■□□□ 1.21
Trnp1Q80ZI1 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Trnp1Q80ZI1 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Trnp1Q80ZI1 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
Trnp1Q80ZI1 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Trnp1Q80ZI1 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
Trnp1Q80ZI1 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Trnp1Q80ZI1 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC22.59■■□□□ 1.21
Trnp1Q80ZI1 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
Trnp1Q80ZI1 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Trnp1Q80ZI1 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Trnp1Q80ZI1 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Trnp1Q80ZI1 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Trnp1Q80ZI1 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.21
Trnp1Q80ZI1 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
Trnp1Q80ZI1 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC22.58■■□□□ 1.21
Trnp1Q80ZI1 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.21
Trnp1Q80ZI1 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Trnp1Q80ZI1 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Trnp1Q80ZI1 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
Trnp1Q80ZI1 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
Trnp1Q80ZI1 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC22.57■■□□□ 1.2
Trnp1Q80ZI1 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Trnp1Q80ZI1 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
Trnp1Q80ZI1 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC22.57■■□□□ 1.2
Trnp1Q80ZI1 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Trnp1Q80ZI1 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC22.57■■□□□ 1.2
Trnp1Q80ZI1 AC135637.1-201ENSMUST00000227750 365 ntBASIC22.57■■□□□ 1.2
Trnp1Q80ZI1 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC22.57■■□□□ 1.2
Trnp1Q80ZI1 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms