Protein–RNA interactions for Protein: Q80XJ3

Ttc28, Tetratricopeptide repeat protein 28, mousemouse

Predictions only

Length 2,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28Q80XJ3 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.29
Ttc28Q80XJ3 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Ttc28Q80XJ3 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC16.83■□□□□ 0.28
Ttc28Q80XJ3 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ttc28Q80XJ3 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ttc28Q80XJ3 Gm37856-201ENSMUST00000191634 999 ntBASIC16.82■□□□□ 0.28
Ttc28Q80XJ3 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ttc28Q80XJ3 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ttc28Q80XJ3 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC16.82■□□□□ 0.28
Ttc28Q80XJ3 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ttc28Q80XJ3 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Ttc28Q80XJ3 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Ttc28Q80XJ3 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ttc28Q80XJ3 Gm43403-201ENSMUST00000198011 1786 ntBASIC16.82■□□□□ 0.28
Ttc28Q80XJ3 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ttc28Q80XJ3 Gm6211-202ENSMUST00000167849 925 ntBASIC16.81■□□□□ 0.28
Ttc28Q80XJ3 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC16.81■□□□□ 0.28
Ttc28Q80XJ3 Gm6365-201ENSMUST00000054711 744 ntBASIC16.81■□□□□ 0.28
Ttc28Q80XJ3 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ttc28Q80XJ3 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ttc28Q80XJ3 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ttc28Q80XJ3 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ttc28Q80XJ3 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ttc28Q80XJ3 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ttc28Q80XJ3 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC16.81■□□□□ 0.28
Ttc28Q80XJ3 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ttc28Q80XJ3 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ttc28Q80XJ3 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ttc28Q80XJ3 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ttc28Q80XJ3 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ttc28Q80XJ3 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ttc28Q80XJ3 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ttc28Q80XJ3 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC16.8■□□□□ 0.28
Ttc28Q80XJ3 Gm13146-201ENSMUST00000118508 780 ntBASIC16.8■□□□□ 0.28
Ttc28Q80XJ3 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ttc28Q80XJ3 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC16.8■□□□□ 0.28
Ttc28Q80XJ3 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ttc28Q80XJ3 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Ttc28Q80XJ3 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ttc28Q80XJ3 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ttc28Q80XJ3 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ttc28Q80XJ3 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ttc28Q80XJ3 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ttc28Q80XJ3 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC16.8■□□□□ 0.28
Ttc28Q80XJ3 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ttc28Q80XJ3 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC16.8■□□□□ 0.28
Ttc28Q80XJ3 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC16.8■□□□□ 0.28
Ttc28Q80XJ3 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ttc28Q80XJ3 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ttc28Q80XJ3 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ttc28Q80XJ3 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ttc28Q80XJ3 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC16.79■□□□□ 0.28
Ttc28Q80XJ3 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ttc28Q80XJ3 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ttc28Q80XJ3 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ttc28Q80XJ3 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ttc28Q80XJ3 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ttc28Q80XJ3 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ttc28Q80XJ3 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC16.79■□□□□ 0.28
Ttc28Q80XJ3 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ttc28Q80XJ3 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ttc28Q80XJ3 Gm10571-201ENSMUST00000097869 1638 ntBASIC16.79■□□□□ 0.28
Ttc28Q80XJ3 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ttc28Q80XJ3 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Ttc28Q80XJ3 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ttc28Q80XJ3 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ttc28Q80XJ3 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ttc28Q80XJ3 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ttc28Q80XJ3 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
Ttc28Q80XJ3 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ttc28Q80XJ3 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ttc28Q80XJ3 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ttc28Q80XJ3 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC16.78■□□□□ 0.28
Ttc28Q80XJ3 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ttc28Q80XJ3 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ttc28Q80XJ3 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC16.77■□□□□ 0.28
Ttc28Q80XJ3 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC16.77■□□□□ 0.28
Ttc28Q80XJ3 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Ttc28Q80XJ3 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ttc28Q80XJ3 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Ttc28Q80XJ3 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ttc28Q80XJ3 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Ttc28Q80XJ3 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC16.77■□□□□ 0.27
Ttc28Q80XJ3 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Ttc28Q80XJ3 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
Ttc28Q80XJ3 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Ttc28Q80XJ3 CT030146.1-201ENSMUST00000220919 217 ntBASIC16.76■□□□□ 0.27
Ttc28Q80XJ3 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ttc28Q80XJ3 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ttc28Q80XJ3 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ttc28Q80XJ3 Gm10655-201ENSMUST00000098658 1397 ntBASIC16.76■□□□□ 0.27
Ttc28Q80XJ3 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC16.76■□□□□ 0.27
Ttc28Q80XJ3 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ttc28Q80XJ3 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ttc28Q80XJ3 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ttc28Q80XJ3 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC16.76■□□□□ 0.27
Ttc28Q80XJ3 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC16.76■□□□□ 0.27
Ttc28Q80XJ3 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ttc28Q80XJ3 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Ttc28Q80XJ3 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms