Protein–RNA interactions for Protein: Q80WG7

Trim36, E3 ubiquitin-protein ligase Trim36, mousemouse

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim36Q80WG7 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim36Q80WG7 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim36Q80WG7 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim36Q80WG7 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim36Q80WG7 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Trim36Q80WG7 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
Trim36Q80WG7 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Trim36Q80WG7 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim36Q80WG7 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim36Q80WG7 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Trim36Q80WG7 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim36Q80WG7 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Trim36Q80WG7 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim36Q80WG7 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim36Q80WG7 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Trim36Q80WG7 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim36Q80WG7 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim36Q80WG7 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Trim36Q80WG7 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim36Q80WG7 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Trim36Q80WG7 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim36Q80WG7 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim36Q80WG7 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim36Q80WG7 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim36Q80WG7 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim36Q80WG7 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim36Q80WG7 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Trim36Q80WG7 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Trim36Q80WG7 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim36Q80WG7 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim36Q80WG7 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Trim36Q80WG7 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim36Q80WG7 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim36Q80WG7 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Trim36Q80WG7 Gm21956-201ENSMUST00000179946 522 ntBASIC19.03■□□□□ 0.64
Trim36Q80WG7 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim36Q80WG7 Gm9847-201ENSMUST00000052528 599 ntBASIC19.03■□□□□ 0.64
Trim36Q80WG7 Gm13241-201ENSMUST00000094493 780 ntBASIC19.03■□□□□ 0.64
Trim36Q80WG7 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Trim36Q80WG7 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Trim36Q80WG7 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim36Q80WG7 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim36Q80WG7 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim36Q80WG7 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim36Q80WG7 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Trim36Q80WG7 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim36Q80WG7 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Trim36Q80WG7 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Trim36Q80WG7 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim36Q80WG7 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim36Q80WG7 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim36Q80WG7 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Trim36Q80WG7 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Trim36Q80WG7 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Trim36Q80WG7 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.01■□□□□ 0.63
Trim36Q80WG7 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim36Q80WG7 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim36Q80WG7 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim36Q80WG7 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Trim36Q80WG7 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim36Q80WG7 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC19.01■□□□□ 0.63
Trim36Q80WG7 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trim36Q80WG7 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trim36Q80WG7 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Trim36Q80WG7 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trim36Q80WG7 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19■□□□□ 0.63
Trim36Q80WG7 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Trim36Q80WG7 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19■□□□□ 0.63
Trim36Q80WG7 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
Trim36Q80WG7 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC19■□□□□ 0.63
Trim36Q80WG7 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC19■□□□□ 0.63
Trim36Q80WG7 Gm43034-201ENSMUST00000198678 1364 ntBASIC19■□□□□ 0.63
Trim36Q80WG7 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Trim36Q80WG7 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19■□□□□ 0.63
Trim36Q80WG7 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19■□□□□ 0.63
Trim36Q80WG7 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trim36Q80WG7 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trim36Q80WG7 Iqck-206ENSMUST00000208658 2891 ntBASIC19■□□□□ 0.63
Trim36Q80WG7 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Trim36Q80WG7 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trim36Q80WG7 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trim36Q80WG7 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim36Q80WG7 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim36Q80WG7 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC18.99■□□□□ 0.63
Trim36Q80WG7 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Trim36Q80WG7 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim36Q80WG7 Golph3-202ENSMUST00000226517 2359 ntBASIC18.99■□□□□ 0.63
Trim36Q80WG7 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Trim36Q80WG7 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim36Q80WG7 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim36Q80WG7 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim36Q80WG7 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim36Q80WG7 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC18.98■□□□□ 0.63
Trim36Q80WG7 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Trim36Q80WG7 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Trim36Q80WG7 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim36Q80WG7 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim36Q80WG7 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim36Q80WG7 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.98■□□□□ 0.63
Trim36Q80WG7 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms