Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC22.85■■□□□ 1.25
Prpf40bQ80W14 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC22.85■■□□□ 1.25
Prpf40bQ80W14 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC22.85■■□□□ 1.25
Prpf40bQ80W14 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Prpf40bQ80W14 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC22.85■■□□□ 1.25
Prpf40bQ80W14 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Prpf40bQ80W14 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Prpf40bQ80W14 Gm44949-201ENSMUST00000206423 1450 ntBASIC22.85■■□□□ 1.25
Prpf40bQ80W14 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC22.85■■□□□ 1.25
Prpf40bQ80W14 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Prpf40bQ80W14 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Prpf40bQ80W14 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC22.84■■□□□ 1.25
Prpf40bQ80W14 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC22.84■■□□□ 1.25
Prpf40bQ80W14 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC22.84■■□□□ 1.25
Prpf40bQ80W14 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC22.84■■□□□ 1.25
Prpf40bQ80W14 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Prpf40bQ80W14 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC22.84■■□□□ 1.25
Prpf40bQ80W14 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC22.83■■□□□ 1.25
Prpf40bQ80W14 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Prpf40bQ80W14 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC22.83■■□□□ 1.25
Prpf40bQ80W14 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC22.83■■□□□ 1.25
Prpf40bQ80W14 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Prpf40bQ80W14 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC22.83■■□□□ 1.25
Prpf40bQ80W14 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
Prpf40bQ80W14 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
Prpf40bQ80W14 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC22.83■■□□□ 1.24
Prpf40bQ80W14 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC22.82■■□□□ 1.24
Prpf40bQ80W14 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Prpf40bQ80W14 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Prpf40bQ80W14 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC22.82■■□□□ 1.24
Prpf40bQ80W14 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Prpf40bQ80W14 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Prpf40bQ80W14 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Prpf40bQ80W14 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Prpf40bQ80W14 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC22.81■■□□□ 1.24
Prpf40bQ80W14 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Prpf40bQ80W14 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Prpf40bQ80W14 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC22.81■■□□□ 1.24
Prpf40bQ80W14 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC22.81■■□□□ 1.24
Prpf40bQ80W14 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC22.81■■□□□ 1.24
Prpf40bQ80W14 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC22.81■■□□□ 1.24
Prpf40bQ80W14 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC22.8■■□□□ 1.24
Prpf40bQ80W14 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Prpf40bQ80W14 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Prpf40bQ80W14 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC22.8■■□□□ 1.24
Prpf40bQ80W14 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC22.8■■□□□ 1.24
Prpf40bQ80W14 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Prpf40bQ80W14 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Prpf40bQ80W14 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Prpf40bQ80W14 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC22.79■■□□□ 1.24
Prpf40bQ80W14 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC22.79■■□□□ 1.24
Prpf40bQ80W14 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC22.79■■□□□ 1.24
Prpf40bQ80W14 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC22.79■■□□□ 1.24
Prpf40bQ80W14 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Prpf40bQ80W14 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Prpf40bQ80W14 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC22.79■■□□□ 1.24
Prpf40bQ80W14 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC22.79■■□□□ 1.24
Prpf40bQ80W14 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Prpf40bQ80W14 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC22.79■■□□□ 1.24
Prpf40bQ80W14 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Prpf40bQ80W14 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC22.78■■□□□ 1.24
Prpf40bQ80W14 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Prpf40bQ80W14 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
Prpf40bQ80W14 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC22.78■■□□□ 1.24
Prpf40bQ80W14 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Prpf40bQ80W14 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Prpf40bQ80W14 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC22.77■■□□□ 1.24
Prpf40bQ80W14 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Prpf40bQ80W14 Gm43530-201ENSMUST00000195920 274 ntBASIC22.77■■□□□ 1.24
Prpf40bQ80W14 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC22.77■■□□□ 1.24
Prpf40bQ80W14 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC22.77■■□□□ 1.24
Prpf40bQ80W14 Gm10209-201ENSMUST00000203397 1607 ntBASIC22.77■■□□□ 1.24
Prpf40bQ80W14 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC22.76■■□□□ 1.23
Prpf40bQ80W14 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Prpf40bQ80W14 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Prpf40bQ80W14 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC22.76■■□□□ 1.23
Prpf40bQ80W14 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Prpf40bQ80W14 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Prpf40bQ80W14 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC22.76■■□□□ 1.23
Prpf40bQ80W14 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Prpf40bQ80W14 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Prpf40bQ80W14 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Prpf40bQ80W14 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Prpf40bQ80W14 Gm12933-201ENSMUST00000120203 872 ntBASIC22.75■■□□□ 1.23
Prpf40bQ80W14 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Prpf40bQ80W14 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Prpf40bQ80W14 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Prpf40bQ80W14 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC22.75■■□□□ 1.23
Prpf40bQ80W14 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Prpf40bQ80W14 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Prpf40bQ80W14 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Prpf40bQ80W14 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC22.74■■□□□ 1.23
Prpf40bQ80W14 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC22.74■■□□□ 1.23
Prpf40bQ80W14 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC22.74■■□□□ 1.23
Prpf40bQ80W14 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Prpf40bQ80W14 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Prpf40bQ80W14 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC22.74■■□□□ 1.23
Prpf40bQ80W14 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC22.74■■□□□ 1.23
Prpf40bQ80W14 Gm5913-201ENSMUST00000119397 1399 ntBASIC22.74■■□□□ 1.23
Prpf40bQ80W14 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms