Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.48■□□□□ 0.71
Pcdh19Q80TF3 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdh19Q80TF3 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdh19Q80TF3 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Pcdh19Q80TF3 Gm11421-201ENSMUST00000122124 294 ntBASIC19.47■□□□□ 0.71
Pcdh19Q80TF3 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdh19Q80TF3 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.47■□□□□ 0.71
Pcdh19Q80TF3 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Pcdh19Q80TF3 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdh19Q80TF3 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdh19Q80TF3 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdh19Q80TF3 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdh19Q80TF3 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdh19Q80TF3 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdh19Q80TF3 AC165080.2-201ENSMUST00000217491 1530 ntBASIC19.46■□□□□ 0.71
Pcdh19Q80TF3 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdh19Q80TF3 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC19.46■□□□□ 0.71
Pcdh19Q80TF3 Gm5874-201ENSMUST00000096101 508 ntBASIC19.46■□□□□ 0.71
Pcdh19Q80TF3 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdh19Q80TF3 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdh19Q80TF3 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.46■□□□□ 0.71
Pcdh19Q80TF3 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdh19Q80TF3 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.45■□□□□ 0.7
Pcdh19Q80TF3 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdh19Q80TF3 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC19.45■□□□□ 0.7
Pcdh19Q80TF3 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Pcdh19Q80TF3 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Pcdh19Q80TF3 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdh19Q80TF3 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdh19Q80TF3 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdh19Q80TF3 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdh19Q80TF3 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
Pcdh19Q80TF3 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Pcdh19Q80TF3 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdh19Q80TF3 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdh19Q80TF3 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdh19Q80TF3 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdh19Q80TF3 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdh19Q80TF3 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdh19Q80TF3 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdh19Q80TF3 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdh19Q80TF3 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdh19Q80TF3 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdh19Q80TF3 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdh19Q80TF3 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdh19Q80TF3 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdh19Q80TF3 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdh19Q80TF3 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdh19Q80TF3 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC19.42■□□□□ 0.7
Pcdh19Q80TF3 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdh19Q80TF3 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdh19Q80TF3 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC19.42■□□□□ 0.7
Pcdh19Q80TF3 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC19.42■□□□□ 0.7
Pcdh19Q80TF3 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Pcdh19Q80TF3 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdh19Q80TF3 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdh19Q80TF3 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdh19Q80TF3 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdh19Q80TF3 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdh19Q80TF3 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdh19Q80TF3 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.41■□□□□ 0.7
Pcdh19Q80TF3 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdh19Q80TF3 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdh19Q80TF3 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdh19Q80TF3 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdh19Q80TF3 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC19.41■□□□□ 0.7
Pcdh19Q80TF3 AC137127.1-201ENSMUST00000213466 1078 ntBASIC19.41■□□□□ 0.7
Pcdh19Q80TF3 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdh19Q80TF3 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdh19Q80TF3 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdh19Q80TF3 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.41■□□□□ 0.7
Pcdh19Q80TF3 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdh19Q80TF3 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdh19Q80TF3 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
Pcdh19Q80TF3 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdh19Q80TF3 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdh19Q80TF3 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
Pcdh19Q80TF3 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Pcdh19Q80TF3 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdh19Q80TF3 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdh19Q80TF3 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdh19Q80TF3 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdh19Q80TF3 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdh19Q80TF3 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Pcdh19Q80TF3 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdh19Q80TF3 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Pcdh19Q80TF3 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
Pcdh19Q80TF3 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdh19Q80TF3 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Pcdh19Q80TF3 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdh19Q80TF3 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC19.39■□□□□ 0.69
Pcdh19Q80TF3 Gm10493-201ENSMUST00000097270 612 ntBASIC19.39■□□□□ 0.69
Pcdh19Q80TF3 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Pcdh19Q80TF3 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdh19Q80TF3 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdh19Q80TF3 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdh19Q80TF3 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Pcdh19Q80TF3 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC19.38■□□□□ 0.69
Pcdh19Q80TF3 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdh19Q80TF3 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms