Protein–RNA interactions for Protein: Q6QIY3

Scn10a, Sodium channel protein type 10 subunit alpha, mousemouse

Predictions only

Length 1,958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn10aQ6QIY3 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Scn10aQ6QIY3 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC22.96■■□□□ 1.27
Scn10aQ6QIY3 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Scn10aQ6QIY3 AC122428.2-201ENSMUST00000216321 1832 ntBASIC22.96■■□□□ 1.27
Scn10aQ6QIY3 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Scn10aQ6QIY3 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC22.96■■□□□ 1.27
Scn10aQ6QIY3 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC22.96■■□□□ 1.27
Scn10aQ6QIY3 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC22.96■■□□□ 1.27
Scn10aQ6QIY3 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC22.96■■□□□ 1.27
Scn10aQ6QIY3 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Scn10aQ6QIY3 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Scn10aQ6QIY3 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.27
Scn10aQ6QIY3 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC22.95■■□□□ 1.26
Scn10aQ6QIY3 Gm6211-202ENSMUST00000167849 925 ntBASIC22.95■■□□□ 1.26
Scn10aQ6QIY3 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Scn10aQ6QIY3 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Scn10aQ6QIY3 Gm7290-201ENSMUST00000104990 617 ntBASIC22.94■■□□□ 1.26
Scn10aQ6QIY3 Gm12918-201ENSMUST00000120234 636 ntBASIC22.94■■□□□ 1.26
Scn10aQ6QIY3 Gm15710-201ENSMUST00000121821 636 ntBASIC22.94■■□□□ 1.26
Scn10aQ6QIY3 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC22.94■■□□□ 1.26
Scn10aQ6QIY3 Gm26524-201ENSMUST00000192339 390 ntBASIC22.94■■□□□ 1.26
Scn10aQ6QIY3 Gm5075-201ENSMUST00000196916 622 ntBASIC22.94■■□□□ 1.26
Scn10aQ6QIY3 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Scn10aQ6QIY3 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC22.94■■□□□ 1.26
Scn10aQ6QIY3 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC22.94■■□□□ 1.26
Scn10aQ6QIY3 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Scn10aQ6QIY3 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Scn10aQ6QIY3 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Scn10aQ6QIY3 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Scn10aQ6QIY3 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC22.93■■□□□ 1.26
Scn10aQ6QIY3 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC22.93■■□□□ 1.26
Scn10aQ6QIY3 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC22.93■■□□□ 1.26
Scn10aQ6QIY3 Gm10252-201ENSMUST00000209541 832 ntBASIC22.93■■□□□ 1.26
Scn10aQ6QIY3 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Scn10aQ6QIY3 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Scn10aQ6QIY3 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Scn10aQ6QIY3 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Scn10aQ6QIY3 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC22.92■■□□□ 1.26
Scn10aQ6QIY3 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Scn10aQ6QIY3 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
Scn10aQ6QIY3 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Scn10aQ6QIY3 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC22.91■■□□□ 1.26
Scn10aQ6QIY3 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Scn10aQ6QIY3 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Scn10aQ6QIY3 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Scn10aQ6QIY3 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC22.91■■□□□ 1.26
Scn10aQ6QIY3 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC22.91■■□□□ 1.26
Scn10aQ6QIY3 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Scn10aQ6QIY3 Gm10655-201ENSMUST00000098658 1397 ntBASIC22.9■■□□□ 1.26
Scn10aQ6QIY3 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC22.9■■□□□ 1.26
Scn10aQ6QIY3 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC22.9■■□□□ 1.26
Scn10aQ6QIY3 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC22.89■■□□□ 1.26
Scn10aQ6QIY3 Gm22240-201ENSMUST00000175225 82 ntBASIC22.89■■□□□ 1.26
Scn10aQ6QIY3 Gm38205-201ENSMUST00000192243 258 ntBASIC22.89■■□□□ 1.26
Scn10aQ6QIY3 AC122769.4-201ENSMUST00000228166 901 ntBASIC22.89■■□□□ 1.26
Scn10aQ6QIY3 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC22.89■■□□□ 1.26
Scn10aQ6QIY3 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.26
Scn10aQ6QIY3 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
Scn10aQ6QIY3 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
Scn10aQ6QIY3 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Scn10aQ6QIY3 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
Scn10aQ6QIY3 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC22.89■■□□□ 1.25
Scn10aQ6QIY3 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC22.89■■□□□ 1.25
Scn10aQ6QIY3 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC22.89■■□□□ 1.25
Scn10aQ6QIY3 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC22.89■■□□□ 1.25
Scn10aQ6QIY3 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC22.89■■□□□ 1.25
Scn10aQ6QIY3 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC22.88■■□□□ 1.25
Scn10aQ6QIY3 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC22.88■■□□□ 1.25
Scn10aQ6QIY3 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Scn10aQ6QIY3 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Scn10aQ6QIY3 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Scn10aQ6QIY3 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Scn10aQ6QIY3 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC22.88■■□□□ 1.25
Scn10aQ6QIY3 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC22.88■■□□□ 1.25
Scn10aQ6QIY3 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC22.88■■□□□ 1.25
Scn10aQ6QIY3 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC22.88■■□□□ 1.25
Scn10aQ6QIY3 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Scn10aQ6QIY3 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
Scn10aQ6QIY3 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC22.87■■□□□ 1.25
Scn10aQ6QIY3 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC22.87■■□□□ 1.25
Scn10aQ6QIY3 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC22.87■■□□□ 1.25
Scn10aQ6QIY3 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Scn10aQ6QIY3 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC22.87■■□□□ 1.25
Scn10aQ6QIY3 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC22.87■■□□□ 1.25
Scn10aQ6QIY3 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Scn10aQ6QIY3 Gm5408-201ENSMUST00000197998 747 ntBASIC22.87■■□□□ 1.25
Scn10aQ6QIY3 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC22.87■■□□□ 1.25
Scn10aQ6QIY3 Gm20049-201ENSMUST00000219950 730 ntBASIC22.87■■□□□ 1.25
Scn10aQ6QIY3 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Scn10aQ6QIY3 Gm13534-201ENSMUST00000121169 513 ntBASIC22.87■■□□□ 1.25
Scn10aQ6QIY3 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC22.87■■□□□ 1.25
Scn10aQ6QIY3 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Scn10aQ6QIY3 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Scn10aQ6QIY3 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC22.86■■□□□ 1.25
Scn10aQ6QIY3 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Scn10aQ6QIY3 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Scn10aQ6QIY3 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC22.86■■□□□ 1.25
Scn10aQ6QIY3 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
Scn10aQ6QIY3 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Scn10aQ6QIY3 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms