Protein–RNA interactions for Protein: Q6P1D7

Slx4, Structure-specific endonuclease subunit SLX4, mousemouse

Predictions only

Length 1,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slx4Q6P1D7 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Slx4Q6P1D7 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Slx4Q6P1D7 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
Slx4Q6P1D7 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
Slx4Q6P1D7 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
Slx4Q6P1D7 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC31.15■■■□□ 2.58
Slx4Q6P1D7 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC31.15■■■□□ 2.58
Slx4Q6P1D7 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC31.15■■■□□ 2.58
Slx4Q6P1D7 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC31.15■■■□□ 2.58
Slx4Q6P1D7 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
Slx4Q6P1D7 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
Slx4Q6P1D7 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
Slx4Q6P1D7 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC31.15■■■□□ 2.58
Slx4Q6P1D7 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
Slx4Q6P1D7 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC31.14■■■□□ 2.58
Slx4Q6P1D7 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC31.14■■■□□ 2.58
Slx4Q6P1D7 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
Slx4Q6P1D7 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
Slx4Q6P1D7 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
Slx4Q6P1D7 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
Slx4Q6P1D7 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
Slx4Q6P1D7 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
Slx4Q6P1D7 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC31.14■■■□□ 2.58
Slx4Q6P1D7 Gm10571-201ENSMUST00000097869 1638 ntBASIC31.14■■■□□ 2.57
Slx4Q6P1D7 CT010467.1-202ENSMUST00000205406 714 ntBASIC31.13■■■□□ 2.57
Slx4Q6P1D7 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC31.13■■■□□ 2.57
Slx4Q6P1D7 Gm8520-201ENSMUST00000186517 868 ntBASIC31.13■■■□□ 2.57
Slx4Q6P1D7 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
Slx4Q6P1D7 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC31.12■■■□□ 2.57
Slx4Q6P1D7 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC31.12■■■□□ 2.57
Slx4Q6P1D7 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC31.12■■■□□ 2.57
Slx4Q6P1D7 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC31.12■■■□□ 2.57
Slx4Q6P1D7 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC31.12■■■□□ 2.57
Slx4Q6P1D7 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC31.12■■■□□ 2.57
Slx4Q6P1D7 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC31.12■■■□□ 2.57
Slx4Q6P1D7 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
Slx4Q6P1D7 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
Slx4Q6P1D7 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC31.11■■■□□ 2.57
Slx4Q6P1D7 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC31.11■■■□□ 2.57
Slx4Q6P1D7 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
Slx4Q6P1D7 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC31.11■■■□□ 2.57
Slx4Q6P1D7 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
Slx4Q6P1D7 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC31.11■■■□□ 2.57
Slx4Q6P1D7 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
Slx4Q6P1D7 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
Slx4Q6P1D7 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC31.1■■■□□ 2.57
Slx4Q6P1D7 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC31.1■■■□□ 2.57
Slx4Q6P1D7 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC31.1■■■□□ 2.57
Slx4Q6P1D7 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC31.1■■■□□ 2.57
Slx4Q6P1D7 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC31.1■■■□□ 2.57
Slx4Q6P1D7 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
Slx4Q6P1D7 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC31.1■■■□□ 2.57
Slx4Q6P1D7 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC31.1■■■□□ 2.57
Slx4Q6P1D7 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
Slx4Q6P1D7 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
Slx4Q6P1D7 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC31.09■■■□□ 2.57
Slx4Q6P1D7 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
Slx4Q6P1D7 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC31.09■■■□□ 2.57
Slx4Q6P1D7 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
Slx4Q6P1D7 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
Slx4Q6P1D7 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC31.08■■■□□ 2.57
Slx4Q6P1D7 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC31.08■■■□□ 2.57
Slx4Q6P1D7 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
Slx4Q6P1D7 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC31.08■■■□□ 2.57
Slx4Q6P1D7 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
Slx4Q6P1D7 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
Slx4Q6P1D7 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
Slx4Q6P1D7 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC31.07■■■□□ 2.56
Slx4Q6P1D7 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC31.06■■■□□ 2.56
Slx4Q6P1D7 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
Slx4Q6P1D7 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
Slx4Q6P1D7 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC31.06■■■□□ 2.56
Slx4Q6P1D7 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC31.05■■■□□ 2.56
Slx4Q6P1D7 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC31.05■■■□□ 2.56
Slx4Q6P1D7 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC31.05■■■□□ 2.56
Slx4Q6P1D7 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
Slx4Q6P1D7 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC31.05■■■□□ 2.56
Slx4Q6P1D7 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC31.05■■■□□ 2.56
Slx4Q6P1D7 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
Slx4Q6P1D7 Mir7071-201ENSMUST00000184847 69 ntBASIC31.05■■■□□ 2.56
Slx4Q6P1D7 Gm20049-201ENSMUST00000219950 730 ntBASIC31.05■■■□□ 2.56
Slx4Q6P1D7 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
Slx4Q6P1D7 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
Slx4Q6P1D7 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
Slx4Q6P1D7 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
Slx4Q6P1D7 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC31.04■■■□□ 2.56
Slx4Q6P1D7 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC31.04■■■□□ 2.56
Slx4Q6P1D7 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC31.04■■■□□ 2.56
Slx4Q6P1D7 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
Slx4Q6P1D7 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC31.03■■■□□ 2.56
Slx4Q6P1D7 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC31.03■■■□□ 2.56
Slx4Q6P1D7 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
Slx4Q6P1D7 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
Slx4Q6P1D7 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
Slx4Q6P1D7 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
Slx4Q6P1D7 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
Slx4Q6P1D7 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
Slx4Q6P1D7 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC31.02■■■□□ 2.56
Slx4Q6P1D7 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC31.02■■■□□ 2.56
Slx4Q6P1D7 Gm13168-201ENSMUST00000121771 632 ntBASIC31.02■■■□□ 2.56
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms