Protein–RNA interactions for Protein: Q62191

Trim21, E3 ubiquitin-protein ligase TRIM21, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim21Q62191 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim21Q62191 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
Trim21Q62191 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Trim21Q62191 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim21Q62191 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim21Q62191 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim21Q62191 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim21Q62191 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC20.86■□□□□ 0.93
Trim21Q62191 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim21Q62191 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Trim21Q62191 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim21Q62191 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim21Q62191 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Trim21Q62191 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC20.85■□□□□ 0.93
Trim21Q62191 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
Trim21Q62191 Gm43530-201ENSMUST00000195920 274 ntBASIC20.85■□□□□ 0.93
Trim21Q62191 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim21Q62191 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Trim21Q62191 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim21Q62191 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC20.84■□□□□ 0.93
Trim21Q62191 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC20.84■□□□□ 0.93
Trim21Q62191 Mir6236-201ENSMUST00000184437 123 ntBASIC20.84■□□□□ 0.93
Trim21Q62191 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Trim21Q62191 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim21Q62191 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim21Q62191 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC20.84■□□□□ 0.93
Trim21Q62191 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim21Q62191 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim21Q62191 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trim21Q62191 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Trim21Q62191 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Trim21Q62191 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trim21Q62191 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC20.83■□□□□ 0.93
Trim21Q62191 Gm10657-201ENSMUST00000193528 1031 ntBASIC20.83■□□□□ 0.93
Trim21Q62191 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC20.83■□□□□ 0.93
Trim21Q62191 Gm9959-201ENSMUST00000068277 390 ntBASIC20.83■□□□□ 0.93
Trim21Q62191 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Trim21Q62191 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Trim21Q62191 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
Trim21Q62191 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Trim21Q62191 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Trim21Q62191 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Trim21Q62191 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Trim21Q62191 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trim21Q62191 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Trim21Q62191 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Trim21Q62191 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trim21Q62191 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC20.82■□□□□ 0.92
Trim21Q62191 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trim21Q62191 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trim21Q62191 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trim21Q62191 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trim21Q62191 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim21Q62191 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Trim21Q62191 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Trim21Q62191 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC20.81■□□□□ 0.92
Trim21Q62191 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Trim21Q62191 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim21Q62191 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Trim21Q62191 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim21Q62191 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim21Q62191 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim21Q62191 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim21Q62191 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Trim21Q62191 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Trim21Q62191 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim21Q62191 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim21Q62191 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim21Q62191 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.8■□□□□ 0.92
Trim21Q62191 AC093043.1-201ENSMUST00000226700 898 ntBASIC20.8■□□□□ 0.92
Trim21Q62191 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim21Q62191 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim21Q62191 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Trim21Q62191 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.79■□□□□ 0.92
Trim21Q62191 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Trim21Q62191 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC20.79■□□□□ 0.92
Trim21Q62191 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Trim21Q62191 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim21Q62191 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim21Q62191 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim21Q62191 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim21Q62191 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim21Q62191 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim21Q62191 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Trim21Q62191 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC20.78■□□□□ 0.92
Trim21Q62191 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Trim21Q62191 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC20.78■□□□□ 0.92
Trim21Q62191 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim21Q62191 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim21Q62191 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim21Q62191 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim21Q62191 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim21Q62191 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC20.77■□□□□ 0.92
Trim21Q62191 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC20.77■□□□□ 0.92
Trim21Q62191 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC20.77■□□□□ 0.92
Trim21Q62191 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim21Q62191 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim21Q62191 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim21Q62191 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim21Q62191 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 63.3 ms