Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ClpbQ60649 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ClpbQ60649 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC18.99■□□□□ 0.63
ClpbQ60649 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
ClpbQ60649 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
ClpbQ60649 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ClpbQ60649 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
ClpbQ60649 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
ClpbQ60649 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
ClpbQ60649 Gm8770-201ENSMUST00000121113 1109 ntBASIC18.98■□□□□ 0.63
ClpbQ60649 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC18.98■□□□□ 0.63
ClpbQ60649 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC18.98■□□□□ 0.63
ClpbQ60649 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
ClpbQ60649 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
ClpbQ60649 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ClpbQ60649 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ClpbQ60649 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ClpbQ60649 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ClpbQ60649 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ClpbQ60649 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.97■□□□□ 0.63
ClpbQ60649 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
ClpbQ60649 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC18.97■□□□□ 0.63
ClpbQ60649 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
ClpbQ60649 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
ClpbQ60649 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ClpbQ60649 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
ClpbQ60649 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
ClpbQ60649 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ClpbQ60649 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ClpbQ60649 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ClpbQ60649 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
ClpbQ60649 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
ClpbQ60649 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ClpbQ60649 Golph3-202ENSMUST00000226517 2359 ntBASIC18.96■□□□□ 0.63
ClpbQ60649 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ClpbQ60649 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ClpbQ60649 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ClpbQ60649 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
ClpbQ60649 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ClpbQ60649 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
ClpbQ60649 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ClpbQ60649 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.96■□□□□ 0.63
ClpbQ60649 Gm15043-201ENSMUST00000118843 1543 ntBASIC18.95■□□□□ 0.62
ClpbQ60649 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ClpbQ60649 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ClpbQ60649 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
ClpbQ60649 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ClpbQ60649 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC18.95■□□□□ 0.62
ClpbQ60649 Gm43530-201ENSMUST00000195920 274 ntBASIC18.95■□□□□ 0.62
ClpbQ60649 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
ClpbQ60649 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
ClpbQ60649 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ClpbQ60649 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
ClpbQ60649 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ClpbQ60649 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ClpbQ60649 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ClpbQ60649 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
ClpbQ60649 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ClpbQ60649 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
ClpbQ60649 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ClpbQ60649 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC18.94■□□□□ 0.62
ClpbQ60649 Gm45417-201ENSMUST00000209533 758 ntBASIC18.94■□□□□ 0.62
ClpbQ60649 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ClpbQ60649 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
ClpbQ60649 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
ClpbQ60649 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ClpbQ60649 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ClpbQ60649 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ClpbQ60649 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ClpbQ60649 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ClpbQ60649 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ClpbQ60649 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ClpbQ60649 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC18.93■□□□□ 0.62
ClpbQ60649 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ClpbQ60649 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC18.92■□□□□ 0.62
ClpbQ60649 Iqck-206ENSMUST00000208658 2891 ntBASIC18.92■□□□□ 0.62
ClpbQ60649 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC18.92■□□□□ 0.62
ClpbQ60649 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ClpbQ60649 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
ClpbQ60649 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC18.92■□□□□ 0.62
ClpbQ60649 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ClpbQ60649 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
ClpbQ60649 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ClpbQ60649 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
ClpbQ60649 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
ClpbQ60649 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ClpbQ60649 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ClpbQ60649 AC166356.1-201ENSMUST00000228236 1426 ntBASIC18.91■□□□□ 0.62
ClpbQ60649 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
ClpbQ60649 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ClpbQ60649 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ClpbQ60649 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ClpbQ60649 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
ClpbQ60649 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
ClpbQ60649 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ClpbQ60649 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ClpbQ60649 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ClpbQ60649 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ClpbQ60649 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC18.9■□□□□ 0.62
ClpbQ60649 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 12.7 ms