Protein–RNA interactions for Protein: Q5TIS6

Noto, Homeobox protein notochord, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NotoQ5TIS6 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NotoQ5TIS6 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NotoQ5TIS6 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NotoQ5TIS6 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
NotoQ5TIS6 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NotoQ5TIS6 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
NotoQ5TIS6 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NotoQ5TIS6 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NotoQ5TIS6 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
NotoQ5TIS6 Etf1-202ENSMUST00000180351 108 ntBASIC16.3■□□□□ 0.2
NotoQ5TIS6 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC16.3■□□□□ 0.2
NotoQ5TIS6 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NotoQ5TIS6 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
NotoQ5TIS6 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NotoQ5TIS6 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NotoQ5TIS6 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
NotoQ5TIS6 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NotoQ5TIS6 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NotoQ5TIS6 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
NotoQ5TIS6 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NotoQ5TIS6 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NotoQ5TIS6 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NotoQ5TIS6 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NotoQ5TIS6 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NotoQ5TIS6 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NotoQ5TIS6 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
NotoQ5TIS6 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NotoQ5TIS6 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NotoQ5TIS6 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NotoQ5TIS6 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NotoQ5TIS6 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NotoQ5TIS6 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NotoQ5TIS6 Krt8-ps-201ENSMUST00000208495 945 ntBASIC16.28■□□□□ 0.2
NotoQ5TIS6 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NotoQ5TIS6 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
NotoQ5TIS6 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
NotoQ5TIS6 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NotoQ5TIS6 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NotoQ5TIS6 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NotoQ5TIS6 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
NotoQ5TIS6 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
NotoQ5TIS6 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
NotoQ5TIS6 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NotoQ5TIS6 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NotoQ5TIS6 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
NotoQ5TIS6 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
NotoQ5TIS6 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NotoQ5TIS6 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC16.27■□□□□ 0.2
NotoQ5TIS6 Gm22238-201ENSMUST00000175222 88 ntBASIC16.27■□□□□ 0.2
NotoQ5TIS6 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NotoQ5TIS6 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
NotoQ5TIS6 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
NotoQ5TIS6 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
NotoQ5TIS6 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC16.27■□□□□ 0.19
NotoQ5TIS6 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NotoQ5TIS6 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC16.26■□□□□ 0.19
NotoQ5TIS6 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
NotoQ5TIS6 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
NotoQ5TIS6 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
NotoQ5TIS6 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
NotoQ5TIS6 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NotoQ5TIS6 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NotoQ5TIS6 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC16.26■□□□□ 0.19
NotoQ5TIS6 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
NotoQ5TIS6 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
NotoQ5TIS6 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NotoQ5TIS6 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
NotoQ5TIS6 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NotoQ5TIS6 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NotoQ5TIS6 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
NotoQ5TIS6 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NotoQ5TIS6 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
NotoQ5TIS6 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NotoQ5TIS6 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NotoQ5TIS6 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NotoQ5TIS6 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC16.25■□□□□ 0.19
NotoQ5TIS6 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC16.25■□□□□ 0.19
NotoQ5TIS6 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NotoQ5TIS6 Gm6802-201ENSMUST00000167843 1983 ntBASIC16.25■□□□□ 0.19
NotoQ5TIS6 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NotoQ5TIS6 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NotoQ5TIS6 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NotoQ5TIS6 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NotoQ5TIS6 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
NotoQ5TIS6 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC16.25■□□□□ 0.19
NotoQ5TIS6 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NotoQ5TIS6 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
NotoQ5TIS6 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NotoQ5TIS6 Gm10616-201ENSMUST00000205285 2127 ntBASIC16.24■□□□□ 0.19
NotoQ5TIS6 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NotoQ5TIS6 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NotoQ5TIS6 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC16.24■□□□□ 0.19
NotoQ5TIS6 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NotoQ5TIS6 Gm9959-201ENSMUST00000068277 390 ntBASIC16.24■□□□□ 0.19
NotoQ5TIS6 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
NotoQ5TIS6 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC16.24■□□□□ 0.19
NotoQ5TIS6 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC16.24■□□□□ 0.19
NotoQ5TIS6 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NotoQ5TIS6 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NotoQ5TIS6 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms