Protein–RNA interactions for Protein: Q5R1I9

Trav2, T cell receptor alpha variable 2 (Fragment), mousemouse

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav2Q5R1I9 Gm43060-201ENSMUST00000200621 289 ntBASIC15.8■□□□□ 0.12
Trav2Q5R1I9 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav2Q5R1I9 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav2Q5R1I9 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trav2Q5R1I9 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav2Q5R1I9 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Trav2Q5R1I9 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav2Q5R1I9 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav2Q5R1I9 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav2Q5R1I9 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav2Q5R1I9 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trav2Q5R1I9 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC15.79■□□□□ 0.12
Trav2Q5R1I9 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC15.79■□□□□ 0.12
Trav2Q5R1I9 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trav2Q5R1I9 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Trav2Q5R1I9 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Trav2Q5R1I9 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Trav2Q5R1I9 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav2Q5R1I9 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Trav2Q5R1I9 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Trav2Q5R1I9 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trav2Q5R1I9 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav2Q5R1I9 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC15.78■□□□□ 0.12
Trav2Q5R1I9 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC15.78■□□□□ 0.12
Trav2Q5R1I9 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trav2Q5R1I9 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trav2Q5R1I9 Gm18284-201ENSMUST00000172604 624 ntBASIC15.78■□□□□ 0.12
Trav2Q5R1I9 Smad6-203ENSMUST00000179458 273 ntBASIC15.78■□□□□ 0.12
Trav2Q5R1I9 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav2Q5R1I9 Dmtn-209ENSMUST00000228295 2572 ntBASIC15.78■□□□□ 0.12
Trav2Q5R1I9 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trav2Q5R1I9 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav2Q5R1I9 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav2Q5R1I9 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC15.77■□□□□ 0.12
Trav2Q5R1I9 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Trav2Q5R1I9 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Trav2Q5R1I9 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Trav2Q5R1I9 Gm8495-201ENSMUST00000188740 694 ntBASIC15.77■□□□□ 0.12
Trav2Q5R1I9 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC15.77■□□□□ 0.12
Trav2Q5R1I9 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC15.77■□□□□ 0.12
Trav2Q5R1I9 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Trav2Q5R1I9 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Trav2Q5R1I9 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav2Q5R1I9 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav2Q5R1I9 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC15.77■□□□□ 0.11
Trav2Q5R1I9 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav2Q5R1I9 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav2Q5R1I9 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trav2Q5R1I9 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav2Q5R1I9 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav2Q5R1I9 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC15.76■□□□□ 0.11
Trav2Q5R1I9 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav2Q5R1I9 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav2Q5R1I9 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav2Q5R1I9 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav2Q5R1I9 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trav2Q5R1I9 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trav2Q5R1I9 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav2Q5R1I9 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav2Q5R1I9 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav2Q5R1I9 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trav2Q5R1I9 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav2Q5R1I9 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
Trav2Q5R1I9 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Trav2Q5R1I9 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Trav2Q5R1I9 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav2Q5R1I9 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav2Q5R1I9 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav2Q5R1I9 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav2Q5R1I9 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trav2Q5R1I9 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav2Q5R1I9 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC15.75■□□□□ 0.11
Trav2Q5R1I9 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC15.75■□□□□ 0.11
Trav2Q5R1I9 Gm40848-201ENSMUST00000221998 324 ntBASIC15.75■□□□□ 0.11
Trav2Q5R1I9 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav2Q5R1I9 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav2Q5R1I9 Gm12504-201ENSMUST00000120860 2231 ntBASIC15.75■□□□□ 0.11
Trav2Q5R1I9 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav2Q5R1I9 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav2Q5R1I9 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav2Q5R1I9 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC15.74■□□□□ 0.11
Trav2Q5R1I9 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav2Q5R1I9 Gm11421-201ENSMUST00000122124 294 ntBASIC15.74■□□□□ 0.11
Trav2Q5R1I9 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav2Q5R1I9 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav2Q5R1I9 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav2Q5R1I9 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC15.74■□□□□ 0.11
Trav2Q5R1I9 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
Trav2Q5R1I9 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trav2Q5R1I9 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav2Q5R1I9 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav2Q5R1I9 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Trav2Q5R1I9 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav2Q5R1I9 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav2Q5R1I9 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC15.73■□□□□ 0.11
Trav2Q5R1I9 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav2Q5R1I9 AC165080.2-201ENSMUST00000217491 1530 ntBASIC15.73■□□□□ 0.11
Trav2Q5R1I9 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav2Q5R1I9 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav2Q5R1I9 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms