Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav5d-4Q5R1F6 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav5d-4Q5R1F6 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav5d-4Q5R1F6 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trav5d-4Q5R1F6 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav5d-4Q5R1F6 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
Trav5d-4Q5R1F6 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC17.04■□□□□ 0.32
Trav5d-4Q5R1F6 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav5d-4Q5R1F6 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav5d-4Q5R1F6 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Trav5d-4Q5R1F6 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trav5d-4Q5R1F6 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trav5d-4Q5R1F6 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav5d-4Q5R1F6 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav5d-4Q5R1F6 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Trav5d-4Q5R1F6 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav5d-4Q5R1F6 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
Trav5d-4Q5R1F6 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Trav5d-4Q5R1F6 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav5d-4Q5R1F6 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav5d-4Q5R1F6 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trav5d-4Q5R1F6 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav5d-4Q5R1F6 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
Trav5d-4Q5R1F6 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav5d-4Q5R1F6 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav5d-4Q5R1F6 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav5d-4Q5R1F6 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav5d-4Q5R1F6 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trav5d-4Q5R1F6 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC17.02■□□□□ 0.32
Trav5d-4Q5R1F6 Mir6236-201ENSMUST00000184437 123 ntBASIC17.02■□□□□ 0.32
Trav5d-4Q5R1F6 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC17.02■□□□□ 0.32
Trav5d-4Q5R1F6 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav5d-4Q5R1F6 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Trav5d-4Q5R1F6 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Trav5d-4Q5R1F6 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Trav5d-4Q5R1F6 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC17.01■□□□□ 0.31
Trav5d-4Q5R1F6 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav5d-4Q5R1F6 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav5d-4Q5R1F6 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav5d-4Q5R1F6 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trav5d-4Q5R1F6 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Trav5d-4Q5R1F6 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav5d-4Q5R1F6 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Trav5d-4Q5R1F6 Gm43909-201ENSMUST00000203443 1876 ntBASIC17.01■□□□□ 0.31
Trav5d-4Q5R1F6 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Trav5d-4Q5R1F6 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trav5d-4Q5R1F6 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Trav5d-4Q5R1F6 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav5d-4Q5R1F6 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav5d-4Q5R1F6 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Trav5d-4Q5R1F6 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav5d-4Q5R1F6 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav5d-4Q5R1F6 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trav5d-4Q5R1F6 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav5d-4Q5R1F6 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav5d-4Q5R1F6 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav5d-4Q5R1F6 Krt8-ps-201ENSMUST00000208495 945 ntBASIC16.99■□□□□ 0.31
Trav5d-4Q5R1F6 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC16.99■□□□□ 0.31
Trav5d-4Q5R1F6 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav5d-4Q5R1F6 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trav5d-4Q5R1F6 Golph3-202ENSMUST00000226517 2359 ntBASIC16.99■□□□□ 0.31
Trav5d-4Q5R1F6 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav5d-4Q5R1F6 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trav5d-4Q5R1F6 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav5d-4Q5R1F6 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav5d-4Q5R1F6 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trav5d-4Q5R1F6 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav5d-4Q5R1F6 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav5d-4Q5R1F6 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
Trav5d-4Q5R1F6 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
Trav5d-4Q5R1F6 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav5d-4Q5R1F6 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trav5d-4Q5R1F6 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Trav5d-4Q5R1F6 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav5d-4Q5R1F6 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav5d-4Q5R1F6 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trav5d-4Q5R1F6 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trav5d-4Q5R1F6 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav5d-4Q5R1F6 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav5d-4Q5R1F6 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC16.97■□□□□ 0.31
Trav5d-4Q5R1F6 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC16.97■□□□□ 0.31
Trav5d-4Q5R1F6 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav5d-4Q5R1F6 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav5d-4Q5R1F6 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav5d-4Q5R1F6 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav5d-4Q5R1F6 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav5d-4Q5R1F6 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav5d-4Q5R1F6 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Trav5d-4Q5R1F6 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav5d-4Q5R1F6 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Trav5d-4Q5R1F6 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC16.96■□□□□ 0.31
Trav5d-4Q5R1F6 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Trav5d-4Q5R1F6 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Trav5d-4Q5R1F6 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC16.96■□□□□ 0.31
Trav5d-4Q5R1F6 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Trav5d-4Q5R1F6 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Trav5d-4Q5R1F6 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC16.96■□□□□ 0.31
Trav5d-4Q5R1F6 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
Trav5d-4Q5R1F6 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trav5d-4Q5R1F6 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms