Protein–RNA interactions for Protein: Q4VA53

Pds5b, Sister chromatid cohesion protein PDS5 homolog B, mousemouse

Known RBP Predictions only

Length 1,446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pds5bQ4VA53 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC35.51■■■■□ 3.28
Pds5bQ4VA53 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC35.51■■■■□ 3.27
Pds5bQ4VA53 Gm6576-201ENSMUST00000169678 883 ntBASIC35.5■■■■□ 3.27
Pds5bQ4VA53 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC35.5■■■■□ 3.27
Pds5bQ4VA53 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC35.5■■■■□ 3.27
Pds5bQ4VA53 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC35.49■■■■□ 3.27
Pds5bQ4VA53 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC35.49■■■■□ 3.27
Pds5bQ4VA53 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC35.48■■■■□ 3.27
Pds5bQ4VA53 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC35.48■■■■□ 3.27
Pds5bQ4VA53 Gm27275-201ENSMUST00000184318 272 ntBASIC35.48■■■■□ 3.27
Pds5bQ4VA53 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC35.48■■■■□ 3.27
Pds5bQ4VA53 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC35.48■■■■□ 3.27
Pds5bQ4VA53 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC35.47■■■■□ 3.27
Pds5bQ4VA53 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC35.47■■■■□ 3.27
Pds5bQ4VA53 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC35.46■■■■□ 3.27
Pds5bQ4VA53 Gm715-201ENSMUST00000117865 831 ntBASIC35.46■■■■□ 3.27
Pds5bQ4VA53 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC35.46■■■■□ 3.27
Pds5bQ4VA53 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC35.46■■■■□ 3.27
Pds5bQ4VA53 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC35.46■■■■□ 3.27
Pds5bQ4VA53 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC35.46■■■■□ 3.27
Pds5bQ4VA53 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC35.45■■■■□ 3.27
Pds5bQ4VA53 Gm11643-201ENSMUST00000119578 864 ntBASIC35.45■■■■□ 3.27
Pds5bQ4VA53 Rab3c-203ENSMUST00000224180 967 ntBASIC35.45■■■■□ 3.27
Pds5bQ4VA53 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC35.44■■■■□ 3.26
Pds5bQ4VA53 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC35.44■■■■□ 3.26
Pds5bQ4VA53 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC35.44■■■■□ 3.26
Pds5bQ4VA53 Gm38205-201ENSMUST00000192243 258 ntBASIC35.43■■■■□ 3.26
Pds5bQ4VA53 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC35.43■■■■□ 3.26
Pds5bQ4VA53 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC35.43■■■■□ 3.26
Pds5bQ4VA53 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC35.43■■■■□ 3.26
Pds5bQ4VA53 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC35.43■■■■□ 3.26
Pds5bQ4VA53 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC35.42■■■■□ 3.26
Pds5bQ4VA53 Gm44672-201ENSMUST00000206944 1098 ntBASIC35.42■■■■□ 3.26
Pds5bQ4VA53 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC35.42■■■■□ 3.26
Pds5bQ4VA53 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC35.42■■■■□ 3.26
Pds5bQ4VA53 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC35.41■■■■□ 3.26
Pds5bQ4VA53 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC35.41■■■■□ 3.26
Pds5bQ4VA53 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC35.41■■■■□ 3.26
Pds5bQ4VA53 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC35.41■■■■□ 3.26
Pds5bQ4VA53 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC35.41■■■■□ 3.26
Pds5bQ4VA53 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC35.41■■■■□ 3.26
Pds5bQ4VA53 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC35.4■■■■□ 3.26
Pds5bQ4VA53 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC35.4■■■■□ 3.26
Pds5bQ4VA53 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC35.4■■■■□ 3.26
Pds5bQ4VA53 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC35.4■■■■□ 3.26
Pds5bQ4VA53 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC35.4■■■■□ 3.26
Pds5bQ4VA53 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC35.4■■■■□ 3.26
Pds5bQ4VA53 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC35.4■■■■□ 3.26
Pds5bQ4VA53 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC35.4■■■■□ 3.26
Pds5bQ4VA53 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC35.39■■■■□ 3.26
Pds5bQ4VA53 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC35.39■■■■□ 3.26
Pds5bQ4VA53 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC35.39■■■■□ 3.26
Pds5bQ4VA53 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC35.39■■■■□ 3.26
Pds5bQ4VA53 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC35.39■■■■□ 3.26
Pds5bQ4VA53 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC35.39■■■■□ 3.26
Pds5bQ4VA53 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC35.39■■■■□ 3.26
Pds5bQ4VA53 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC35.39■■■■□ 3.26
Pds5bQ4VA53 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC35.39■■■■□ 3.26
Pds5bQ4VA53 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC35.38■■■■□ 3.26
Pds5bQ4VA53 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC35.38■■■■□ 3.26
Pds5bQ4VA53 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC35.38■■■■□ 3.25
Pds5bQ4VA53 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC35.38■■■■□ 3.25
Pds5bQ4VA53 Gm5643-201ENSMUST00000117081 966 ntBASIC35.38■■■■□ 3.25
Pds5bQ4VA53 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC35.38■■■■□ 3.25
Pds5bQ4VA53 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC35.38■■■■□ 3.25
Pds5bQ4VA53 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC35.38■■■■□ 3.25
Pds5bQ4VA53 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC35.37■■■■□ 3.25
Pds5bQ4VA53 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC35.37■■■■□ 3.25
Pds5bQ4VA53 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC35.37■■■■□ 3.25
Pds5bQ4VA53 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC35.36■■■■□ 3.25
Pds5bQ4VA53 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC35.36■■■■□ 3.25
Pds5bQ4VA53 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC35.36■■■■□ 3.25
Pds5bQ4VA53 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC35.36■■■■□ 3.25
Pds5bQ4VA53 Arhgef33-211ENSMUST00000225658 473 ntBASIC35.36■■■■□ 3.25
Pds5bQ4VA53 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC35.35■■■■□ 3.25
Pds5bQ4VA53 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC35.35■■■■□ 3.25
Pds5bQ4VA53 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC35.35■■■■□ 3.25
Pds5bQ4VA53 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC35.35■■■■□ 3.25
Pds5bQ4VA53 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC35.35■■■■□ 3.25
Pds5bQ4VA53 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC35.34■■■■□ 3.25
Pds5bQ4VA53 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC35.34■■■■□ 3.25
Pds5bQ4VA53 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC35.34■■■■□ 3.25
Pds5bQ4VA53 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC35.34■■■■□ 3.25
Pds5bQ4VA53 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC35.34■■■■□ 3.25
Pds5bQ4VA53 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC35.34■■■■□ 3.25
Pds5bQ4VA53 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC35.33■■■■□ 3.25
Pds5bQ4VA53 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC35.33■■■■□ 3.25
Pds5bQ4VA53 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC35.33■■■■□ 3.25
Pds5bQ4VA53 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC35.33■■■■□ 3.25
Pds5bQ4VA53 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC35.32■■■■□ 3.25
Pds5bQ4VA53 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC35.32■■■■□ 3.25
Pds5bQ4VA53 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC35.31■■■■□ 3.24
Pds5bQ4VA53 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC35.31■■■■□ 3.24
Pds5bQ4VA53 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC35.31■■■■□ 3.24
Pds5bQ4VA53 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC35.31■■■■□ 3.24
Pds5bQ4VA53 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC35.31■■■■□ 3.24
Pds5bQ4VA53 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC35.31■■■■□ 3.24
Pds5bQ4VA53 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC35.31■■■■□ 3.24
Pds5bQ4VA53 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC35.31■■■■□ 3.24
Pds5bQ4VA53 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC35.3■■■■□ 3.24
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms