Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC20.98■□□□□ 0.95
Syne3Q4FZC9 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC20.98■□□□□ 0.95
Syne3Q4FZC9 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Syne3Q4FZC9 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Syne3Q4FZC9 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Syne3Q4FZC9 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Syne3Q4FZC9 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Syne3Q4FZC9 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Syne3Q4FZC9 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Syne3Q4FZC9 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Syne3Q4FZC9 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Syne3Q4FZC9 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Syne3Q4FZC9 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC20.97■□□□□ 0.95
Syne3Q4FZC9 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Syne3Q4FZC9 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Syne3Q4FZC9 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Syne3Q4FZC9 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Syne3Q4FZC9 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Syne3Q4FZC9 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Syne3Q4FZC9 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Syne3Q4FZC9 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Syne3Q4FZC9 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Syne3Q4FZC9 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Syne3Q4FZC9 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC20.96■□□□□ 0.95
Syne3Q4FZC9 Krt8-ps-201ENSMUST00000208495 945 ntBASIC20.96■□□□□ 0.95
Syne3Q4FZC9 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Syne3Q4FZC9 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Syne3Q4FZC9 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Syne3Q4FZC9 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Syne3Q4FZC9 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Syne3Q4FZC9 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Syne3Q4FZC9 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Syne3Q4FZC9 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Syne3Q4FZC9 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Syne3Q4FZC9 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Syne3Q4FZC9 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Syne3Q4FZC9 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Syne3Q4FZC9 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Syne3Q4FZC9 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Syne3Q4FZC9 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC20.95■□□□□ 0.94
Syne3Q4FZC9 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Syne3Q4FZC9 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC20.95■□□□□ 0.94
Syne3Q4FZC9 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC20.95■□□□□ 0.94
Syne3Q4FZC9 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Syne3Q4FZC9 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Syne3Q4FZC9 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Syne3Q4FZC9 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Syne3Q4FZC9 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Syne3Q4FZC9 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Syne3Q4FZC9 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Syne3Q4FZC9 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Syne3Q4FZC9 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Syne3Q4FZC9 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Syne3Q4FZC9 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Syne3Q4FZC9 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Syne3Q4FZC9 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Syne3Q4FZC9 Gm43759-201ENSMUST00000196925 1261 ntBASIC20.93■□□□□ 0.94
Syne3Q4FZC9 Gm9207-201ENSMUST00000198773 1115 ntBASIC20.93■□□□□ 0.94
Syne3Q4FZC9 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Syne3Q4FZC9 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC20.93■□□□□ 0.94
Syne3Q4FZC9 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Syne3Q4FZC9 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Syne3Q4FZC9 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Syne3Q4FZC9 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Syne3Q4FZC9 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Syne3Q4FZC9 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Syne3Q4FZC9 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Syne3Q4FZC9 AC140930.3-201ENSMUST00000222935 274 ntBASIC20.92■□□□□ 0.94
Syne3Q4FZC9 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Syne3Q4FZC9 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Syne3Q4FZC9 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Syne3Q4FZC9 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Syne3Q4FZC9 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC20.91■□□□□ 0.94
Syne3Q4FZC9 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Syne3Q4FZC9 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Syne3Q4FZC9 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Syne3Q4FZC9 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Syne3Q4FZC9 AC166356.1-201ENSMUST00000228236 1426 ntBASIC20.91■□□□□ 0.94
Syne3Q4FZC9 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Syne3Q4FZC9 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Syne3Q4FZC9 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Syne3Q4FZC9 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Syne3Q4FZC9 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Syne3Q4FZC9 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Syne3Q4FZC9 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Syne3Q4FZC9 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Syne3Q4FZC9 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Syne3Q4FZC9 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Syne3Q4FZC9 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Syne3Q4FZC9 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Syne3Q4FZC9 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Syne3Q4FZC9 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC20.9■□□□□ 0.94
Syne3Q4FZC9 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Syne3Q4FZC9 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
Syne3Q4FZC9 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20.9■□□□□ 0.94
Syne3Q4FZC9 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Syne3Q4FZC9 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Syne3Q4FZC9 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Syne3Q4FZC9 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Syne3Q4FZC9 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms