Protein–RNA interactions for Protein: Q3UTC0

B020004J07Rik, RIKEN cDNA B020004J07 gene, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004J07RikQ3UTC0 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
B020004J07RikQ3UTC0 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
B020004J07RikQ3UTC0 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
B020004J07RikQ3UTC0 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC20.63■□□□□ 0.89
B020004J07RikQ3UTC0 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
B020004J07RikQ3UTC0 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
B020004J07RikQ3UTC0 Gm9988-201ENSMUST00000069786 435 ntBASIC20.63■□□□□ 0.89
B020004J07RikQ3UTC0 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
B020004J07RikQ3UTC0 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.63■□□□□ 0.89
B020004J07RikQ3UTC0 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
B020004J07RikQ3UTC0 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
B020004J07RikQ3UTC0 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
B020004J07RikQ3UTC0 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC20.62■□□□□ 0.89
B020004J07RikQ3UTC0 Gm42778-201ENSMUST00000199644 553 ntBASIC20.62■□□□□ 0.89
B020004J07RikQ3UTC0 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
B020004J07RikQ3UTC0 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.62■□□□□ 0.89
B020004J07RikQ3UTC0 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
B020004J07RikQ3UTC0 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
B020004J07RikQ3UTC0 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
B020004J07RikQ3UTC0 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
B020004J07RikQ3UTC0 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
B020004J07RikQ3UTC0 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC20.61■□□□□ 0.89
B020004J07RikQ3UTC0 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC20.61■□□□□ 0.89
B020004J07RikQ3UTC0 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
B020004J07RikQ3UTC0 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
B020004J07RikQ3UTC0 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
B020004J07RikQ3UTC0 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
B020004J07RikQ3UTC0 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
B020004J07RikQ3UTC0 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.61■□□□□ 0.89
B020004J07RikQ3UTC0 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
B020004J07RikQ3UTC0 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
B020004J07RikQ3UTC0 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
B020004J07RikQ3UTC0 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
B020004J07RikQ3UTC0 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC20.59■□□□□ 0.89
B020004J07RikQ3UTC0 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
B020004J07RikQ3UTC0 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
B020004J07RikQ3UTC0 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
B020004J07RikQ3UTC0 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
B020004J07RikQ3UTC0 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
B020004J07RikQ3UTC0 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC20.59■□□□□ 0.89
B020004J07RikQ3UTC0 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
B020004J07RikQ3UTC0 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
B020004J07RikQ3UTC0 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
B020004J07RikQ3UTC0 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
B020004J07RikQ3UTC0 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20.58■□□□□ 0.89
B020004J07RikQ3UTC0 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
B020004J07RikQ3UTC0 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
B020004J07RikQ3UTC0 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC20.58■□□□□ 0.89
B020004J07RikQ3UTC0 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
B020004J07RikQ3UTC0 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC20.58■□□□□ 0.89
B020004J07RikQ3UTC0 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
B020004J07RikQ3UTC0 Reep4-203ENSMUST00000226563 1444 ntBASIC20.58■□□□□ 0.88
B020004J07RikQ3UTC0 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
B020004J07RikQ3UTC0 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.58■□□□□ 0.88
B020004J07RikQ3UTC0 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
B020004J07RikQ3UTC0 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
B020004J07RikQ3UTC0 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
B020004J07RikQ3UTC0 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
B020004J07RikQ3UTC0 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
B020004J07RikQ3UTC0 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
B020004J07RikQ3UTC0 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
B020004J07RikQ3UTC0 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
B020004J07RikQ3UTC0 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
B020004J07RikQ3UTC0 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC20.57■□□□□ 0.88
B020004J07RikQ3UTC0 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
B020004J07RikQ3UTC0 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
B020004J07RikQ3UTC0 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
B020004J07RikQ3UTC0 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.57■□□□□ 0.88
B020004J07RikQ3UTC0 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
B020004J07RikQ3UTC0 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
B020004J07RikQ3UTC0 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
B020004J07RikQ3UTC0 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
B020004J07RikQ3UTC0 Gm14281-201ENSMUST00000121700 1294 ntBASIC20.56■□□□□ 0.88
B020004J07RikQ3UTC0 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
B020004J07RikQ3UTC0 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC20.56■□□□□ 0.88
B020004J07RikQ3UTC0 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
B020004J07RikQ3UTC0 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
B020004J07RikQ3UTC0 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
B020004J07RikQ3UTC0 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
B020004J07RikQ3UTC0 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
B020004J07RikQ3UTC0 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
B020004J07RikQ3UTC0 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
B020004J07RikQ3UTC0 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
B020004J07RikQ3UTC0 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
B020004J07RikQ3UTC0 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC20.54■□□□□ 0.88
B020004J07RikQ3UTC0 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.54■□□□□ 0.88
B020004J07RikQ3UTC0 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
B020004J07RikQ3UTC0 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
B020004J07RikQ3UTC0 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
B020004J07RikQ3UTC0 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC20.54■□□□□ 0.88
B020004J07RikQ3UTC0 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC20.54■□□□□ 0.88
B020004J07RikQ3UTC0 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
B020004J07RikQ3UTC0 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
B020004J07RikQ3UTC0 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
B020004J07RikQ3UTC0 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.54■□□□□ 0.88
B020004J07RikQ3UTC0 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
B020004J07RikQ3UTC0 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
B020004J07RikQ3UTC0 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
B020004J07RikQ3UTC0 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
B020004J07RikQ3UTC0 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms