Protein–RNA interactions for Protein: Q3UTB7

Foxr1, Forkhead box protein R1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxr1Q3UTB7 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC20.27■□□□□ 0.84
Foxr1Q3UTB7 AC099934.2-201ENSMUST00000196389 70 ntBASIC20.27■□□□□ 0.84
Foxr1Q3UTB7 AC156953.1-201ENSMUST00000196953 70 ntBASIC20.27■□□□□ 0.84
Foxr1Q3UTB7 AC157822.2-201ENSMUST00000200291 70 ntBASIC20.27■□□□□ 0.84
Foxr1Q3UTB7 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Foxr1Q3UTB7 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Foxr1Q3UTB7 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Foxr1Q3UTB7 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Foxr1Q3UTB7 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Foxr1Q3UTB7 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Foxr1Q3UTB7 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC20.26■□□□□ 0.83
Foxr1Q3UTB7 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC20.26■□□□□ 0.83
Foxr1Q3UTB7 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Foxr1Q3UTB7 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Foxr1Q3UTB7 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Foxr1Q3UTB7 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Foxr1Q3UTB7 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Foxr1Q3UTB7 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Foxr1Q3UTB7 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Foxr1Q3UTB7 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Foxr1Q3UTB7 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Foxr1Q3UTB7 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Foxr1Q3UTB7 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Foxr1Q3UTB7 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Foxr1Q3UTB7 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC20.25■□□□□ 0.83
Foxr1Q3UTB7 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
Foxr1Q3UTB7 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
Foxr1Q3UTB7 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Foxr1Q3UTB7 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC20.25■□□□□ 0.83
Foxr1Q3UTB7 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Foxr1Q3UTB7 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Foxr1Q3UTB7 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Foxr1Q3UTB7 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Foxr1Q3UTB7 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Foxr1Q3UTB7 Gm10571-201ENSMUST00000097869 1638 ntBASIC20.24■□□□□ 0.83
Foxr1Q3UTB7 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Foxr1Q3UTB7 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Foxr1Q3UTB7 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Foxr1Q3UTB7 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Foxr1Q3UTB7 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC20.24■□□□□ 0.83
Foxr1Q3UTB7 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Foxr1Q3UTB7 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC20.24■□□□□ 0.83
Foxr1Q3UTB7 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Foxr1Q3UTB7 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Foxr1Q3UTB7 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Foxr1Q3UTB7 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.23■□□□□ 0.83
Foxr1Q3UTB7 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Foxr1Q3UTB7 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC20.23■□□□□ 0.83
Foxr1Q3UTB7 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Foxr1Q3UTB7 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Foxr1Q3UTB7 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Foxr1Q3UTB7 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Foxr1Q3UTB7 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Foxr1Q3UTB7 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Foxr1Q3UTB7 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Foxr1Q3UTB7 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Foxr1Q3UTB7 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Foxr1Q3UTB7 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC20.22■□□□□ 0.83
Foxr1Q3UTB7 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Foxr1Q3UTB7 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.22■□□□□ 0.83
Foxr1Q3UTB7 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Foxr1Q3UTB7 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Foxr1Q3UTB7 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Foxr1Q3UTB7 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Foxr1Q3UTB7 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC20.21■□□□□ 0.83
Foxr1Q3UTB7 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Foxr1Q3UTB7 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Foxr1Q3UTB7 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Foxr1Q3UTB7 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.2■□□□□ 0.82
Foxr1Q3UTB7 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Foxr1Q3UTB7 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Foxr1Q3UTB7 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Foxr1Q3UTB7 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Foxr1Q3UTB7 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Foxr1Q3UTB7 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC20.2■□□□□ 0.82
Foxr1Q3UTB7 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Foxr1Q3UTB7 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Foxr1Q3UTB7 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Foxr1Q3UTB7 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Foxr1Q3UTB7 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Foxr1Q3UTB7 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Foxr1Q3UTB7 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC20.19■□□□□ 0.82
Foxr1Q3UTB7 Gm42642-201ENSMUST00000200683 355 ntBASIC20.19■□□□□ 0.82
Foxr1Q3UTB7 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Foxr1Q3UTB7 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Foxr1Q3UTB7 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Foxr1Q3UTB7 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Foxr1Q3UTB7 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Foxr1Q3UTB7 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Foxr1Q3UTB7 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Foxr1Q3UTB7 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Foxr1Q3UTB7 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Foxr1Q3UTB7 Gm27801-201ENSMUST00000184174 223 ntBASIC20.18■□□□□ 0.82
Foxr1Q3UTB7 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Foxr1Q3UTB7 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Foxr1Q3UTB7 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Foxr1Q3UTB7 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Foxr1Q3UTB7 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Foxr1Q3UTB7 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Foxr1Q3UTB7 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms