Protein–RNA interactions for Protein: Q3UPH7

Arhgef40, Rho guanine nucleotide exchange factor 40, mousemouse

Predictions only

Length 1,517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Arhgef40Q3UPH7 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC29.72■■■□□ 2.35
Arhgef40Q3UPH7 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
Arhgef40Q3UPH7 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC29.72■■■□□ 2.35
Arhgef40Q3UPH7 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
Arhgef40Q3UPH7 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
Arhgef40Q3UPH7 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC29.71■■■□□ 2.35
Arhgef40Q3UPH7 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
Arhgef40Q3UPH7 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
Arhgef40Q3UPH7 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
Arhgef40Q3UPH7 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
Arhgef40Q3UPH7 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC29.7■■■□□ 2.34
Arhgef40Q3UPH7 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC29.7■■■□□ 2.34
Arhgef40Q3UPH7 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC29.7■■■□□ 2.34
Arhgef40Q3UPH7 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC29.7■■■□□ 2.34
Arhgef40Q3UPH7 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC29.7■■■□□ 2.34
Arhgef40Q3UPH7 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
Arhgef40Q3UPH7 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
Arhgef40Q3UPH7 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC29.69■■■□□ 2.34
Arhgef40Q3UPH7 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC29.69■■■□□ 2.34
Arhgef40Q3UPH7 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC29.69■■■□□ 2.34
Arhgef40Q3UPH7 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
Arhgef40Q3UPH7 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
Arhgef40Q3UPH7 Gm10653-202ENSMUST00000139570 835 ntBASIC29.68■■■□□ 2.34
Arhgef40Q3UPH7 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
Arhgef40Q3UPH7 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC29.68■■■□□ 2.34
Arhgef40Q3UPH7 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC29.68■■■□□ 2.34
Arhgef40Q3UPH7 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
Arhgef40Q3UPH7 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
Arhgef40Q3UPH7 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
Arhgef40Q3UPH7 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC29.67■■■□□ 2.34
Arhgef40Q3UPH7 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
Arhgef40Q3UPH7 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
Arhgef40Q3UPH7 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC29.66■■■□□ 2.34
Arhgef40Q3UPH7 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
Arhgef40Q3UPH7 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
Arhgef40Q3UPH7 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
Arhgef40Q3UPH7 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
Arhgef40Q3UPH7 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
Arhgef40Q3UPH7 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC29.65■■■□□ 2.34
Arhgef40Q3UPH7 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC29.65■■■□□ 2.34
Arhgef40Q3UPH7 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC29.64■■■□□ 2.34
Arhgef40Q3UPH7 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC29.64■■■□□ 2.34
Arhgef40Q3UPH7 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC29.64■■■□□ 2.34
Arhgef40Q3UPH7 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC29.64■■■□□ 2.34
Arhgef40Q3UPH7 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC29.64■■■□□ 2.33
Arhgef40Q3UPH7 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
Arhgef40Q3UPH7 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
Arhgef40Q3UPH7 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
Arhgef40Q3UPH7 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
Arhgef40Q3UPH7 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC29.62■■■□□ 2.33
Arhgef40Q3UPH7 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC29.62■■■□□ 2.33
Arhgef40Q3UPH7 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
Arhgef40Q3UPH7 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC29.62■■■□□ 2.33
Arhgef40Q3UPH7 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC29.61■■■□□ 2.33
Arhgef40Q3UPH7 CT010467.1-202ENSMUST00000205406 714 ntBASIC29.61■■■□□ 2.33
Arhgef40Q3UPH7 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
Arhgef40Q3UPH7 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC29.61■■■□□ 2.33
Arhgef40Q3UPH7 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
Arhgef40Q3UPH7 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
Arhgef40Q3UPH7 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
Arhgef40Q3UPH7 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC29.6■■■□□ 2.33
Arhgef40Q3UPH7 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
Arhgef40Q3UPH7 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
Arhgef40Q3UPH7 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC29.6■■■□□ 2.33
Arhgef40Q3UPH7 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC29.6■■■□□ 2.33
Arhgef40Q3UPH7 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC29.6■■■□□ 2.33
Arhgef40Q3UPH7 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC29.6■■■□□ 2.33
Arhgef40Q3UPH7 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
Arhgef40Q3UPH7 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
Arhgef40Q3UPH7 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
Arhgef40Q3UPH7 Gm13146-201ENSMUST00000118508 780 ntBASIC29.59■■■□□ 2.33
Arhgef40Q3UPH7 Gm7514-201ENSMUST00000209475 934 ntBASIC29.59■■■□□ 2.33
Arhgef40Q3UPH7 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
Arhgef40Q3UPH7 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
Arhgef40Q3UPH7 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC29.58■■■□□ 2.33
Arhgef40Q3UPH7 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC29.58■■■□□ 2.33
Arhgef40Q3UPH7 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
Arhgef40Q3UPH7 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC29.58■■■□□ 2.33
Arhgef40Q3UPH7 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC29.58■■■□□ 2.33
Arhgef40Q3UPH7 Gm42555-201ENSMUST00000199304 1039 ntBASIC29.58■■■□□ 2.33
Arhgef40Q3UPH7 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC29.58■■■□□ 2.33
Arhgef40Q3UPH7 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC29.58■■■□□ 2.33
Arhgef40Q3UPH7 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC29.58■■■□□ 2.33
Arhgef40Q3UPH7 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
Arhgef40Q3UPH7 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC29.57■■■□□ 2.32
Arhgef40Q3UPH7 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC29.57■■■□□ 2.32
Arhgef40Q3UPH7 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
Arhgef40Q3UPH7 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC29.57■■■□□ 2.32
Arhgef40Q3UPH7 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
Arhgef40Q3UPH7 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC29.57■■■□□ 2.32
Arhgef40Q3UPH7 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC29.56■■■□□ 2.32
Arhgef40Q3UPH7 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC29.56■■■□□ 2.32
Arhgef40Q3UPH7 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC29.56■■■□□ 2.32
Arhgef40Q3UPH7 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
Arhgef40Q3UPH7 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
Arhgef40Q3UPH7 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC29.56■■■□□ 2.32
Arhgef40Q3UPH7 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
Arhgef40Q3UPH7 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC29.55■■■□□ 2.32
Arhgef40Q3UPH7 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
Arhgef40Q3UPH7 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms