Protein–RNA interactions for Protein: Q3ULF4

Spg7, Paraplegin, mousemouse

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg7Q3ULF4 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Spg7Q3ULF4 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Spg7Q3ULF4 Gm27801-201ENSMUST00000184174 223 ntBASIC23.73■■□□□ 1.39
Spg7Q3ULF4 AV356131-201ENSMUST00000206201 750 ntBASIC23.73■■□□□ 1.39
Spg7Q3ULF4 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
Spg7Q3ULF4 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Spg7Q3ULF4 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
Spg7Q3ULF4 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC23.73■■□□□ 1.39
Spg7Q3ULF4 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC23.73■■□□□ 1.39
Spg7Q3ULF4 Gm14281-201ENSMUST00000121700 1294 ntBASIC23.72■■□□□ 1.39
Spg7Q3ULF4 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
Spg7Q3ULF4 Gm9988-201ENSMUST00000069786 435 ntBASIC23.72■■□□□ 1.39
Spg7Q3ULF4 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Spg7Q3ULF4 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
Spg7Q3ULF4 Gm12504-201ENSMUST00000120860 2231 ntBASIC23.72■■□□□ 1.39
Spg7Q3ULF4 Gm17641-201ENSMUST00000166328 2350 ntBASIC23.72■■□□□ 1.39
Spg7Q3ULF4 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Spg7Q3ULF4 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC23.71■■□□□ 1.39
Spg7Q3ULF4 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Spg7Q3ULF4 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC23.71■■□□□ 1.39
Spg7Q3ULF4 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Spg7Q3ULF4 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC23.71■■□□□ 1.39
Spg7Q3ULF4 Gm29257-201ENSMUST00000186115 639 ntBASIC23.71■■□□□ 1.39
Spg7Q3ULF4 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Spg7Q3ULF4 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Spg7Q3ULF4 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC23.71■■□□□ 1.39
Spg7Q3ULF4 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Spg7Q3ULF4 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Spg7Q3ULF4 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
Spg7Q3ULF4 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC23.7■■□□□ 1.38
Spg7Q3ULF4 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC23.7■■□□□ 1.38
Spg7Q3ULF4 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
Spg7Q3ULF4 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Spg7Q3ULF4 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
Spg7Q3ULF4 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Spg7Q3ULF4 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Spg7Q3ULF4 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Spg7Q3ULF4 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Spg7Q3ULF4 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Spg7Q3ULF4 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Spg7Q3ULF4 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
Spg7Q3ULF4 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Spg7Q3ULF4 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC23.68■■□□□ 1.38
Spg7Q3ULF4 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Spg7Q3ULF4 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC23.68■■□□□ 1.38
Spg7Q3ULF4 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Spg7Q3ULF4 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC23.68■■□□□ 1.38
Spg7Q3ULF4 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC23.68■■□□□ 1.38
Spg7Q3ULF4 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Spg7Q3ULF4 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Spg7Q3ULF4 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Spg7Q3ULF4 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Spg7Q3ULF4 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Spg7Q3ULF4 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Spg7Q3ULF4 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
Spg7Q3ULF4 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
Spg7Q3ULF4 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC23.67■■□□□ 1.38
Spg7Q3ULF4 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Spg7Q3ULF4 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC23.67■■□□□ 1.38
Spg7Q3ULF4 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Spg7Q3ULF4 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC23.67■■□□□ 1.38
Spg7Q3ULF4 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC23.67■■□□□ 1.38
Spg7Q3ULF4 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Spg7Q3ULF4 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Spg7Q3ULF4 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Spg7Q3ULF4 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
Spg7Q3ULF4 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Spg7Q3ULF4 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC23.66■■□□□ 1.38
Spg7Q3ULF4 Gm37179-201ENSMUST00000194862 823 ntBASIC23.66■■□□□ 1.38
Spg7Q3ULF4 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC23.66■■□□□ 1.38
Spg7Q3ULF4 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Spg7Q3ULF4 AC124392.1-201ENSMUST00000225172 5324 ntBASIC23.66■■□□□ 1.38
Spg7Q3ULF4 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Spg7Q3ULF4 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Spg7Q3ULF4 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Spg7Q3ULF4 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Spg7Q3ULF4 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC23.65■■□□□ 1.38
Spg7Q3ULF4 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Spg7Q3ULF4 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
Spg7Q3ULF4 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Spg7Q3ULF4 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
Spg7Q3ULF4 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Spg7Q3ULF4 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
Spg7Q3ULF4 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Spg7Q3ULF4 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC23.64■■□□□ 1.37
Spg7Q3ULF4 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Spg7Q3ULF4 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Spg7Q3ULF4 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
Spg7Q3ULF4 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Spg7Q3ULF4 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Spg7Q3ULF4 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Spg7Q3ULF4 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Spg7Q3ULF4 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Spg7Q3ULF4 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC23.63■■□□□ 1.37
Spg7Q3ULF4 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Spg7Q3ULF4 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
Spg7Q3ULF4 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC23.63■■□□□ 1.37
Spg7Q3ULF4 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
Spg7Q3ULF4 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC23.63■■□□□ 1.37
Spg7Q3ULF4 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms