Protein–RNA interactions for Protein: Q3U2C5

Rnf149, E3 ubiquitin-protein ligase RNF149, mousemouse

Predictions only

Length 394 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf149Q3U2C5 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf149Q3U2C5 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf149Q3U2C5 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf149Q3U2C5 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf149Q3U2C5 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf149Q3U2C5 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf149Q3U2C5 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC17.7■□□□□ 0.42
Rnf149Q3U2C5 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC17.7■□□□□ 0.42
Rnf149Q3U2C5 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf149Q3U2C5 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf149Q3U2C5 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf149Q3U2C5 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf149Q3U2C5 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rnf149Q3U2C5 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rnf149Q3U2C5 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rnf149Q3U2C5 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rnf149Q3U2C5 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
Rnf149Q3U2C5 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Rnf149Q3U2C5 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rnf149Q3U2C5 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rnf149Q3U2C5 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rnf149Q3U2C5 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rnf149Q3U2C5 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rnf149Q3U2C5 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rnf149Q3U2C5 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Rnf149Q3U2C5 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rnf149Q3U2C5 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC17.68■□□□□ 0.42
Rnf149Q3U2C5 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC17.68■□□□□ 0.42
Rnf149Q3U2C5 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Rnf149Q3U2C5 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf149Q3U2C5 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf149Q3U2C5 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf149Q3U2C5 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf149Q3U2C5 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf149Q3U2C5 Etf1-202ENSMUST00000180351 108 ntBASIC17.67■□□□□ 0.42
Rnf149Q3U2C5 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf149Q3U2C5 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf149Q3U2C5 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf149Q3U2C5 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC17.67■□□□□ 0.42
Rnf149Q3U2C5 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf149Q3U2C5 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf149Q3U2C5 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf149Q3U2C5 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf149Q3U2C5 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf149Q3U2C5 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf149Q3U2C5 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf149Q3U2C5 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf149Q3U2C5 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf149Q3U2C5 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC17.66■□□□□ 0.42
Rnf149Q3U2C5 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Rnf149Q3U2C5 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf149Q3U2C5 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf149Q3U2C5 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Rnf149Q3U2C5 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf149Q3U2C5 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf149Q3U2C5 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf149Q3U2C5 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf149Q3U2C5 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf149Q3U2C5 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf149Q3U2C5 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf149Q3U2C5 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf149Q3U2C5 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.65■□□□□ 0.42
Rnf149Q3U2C5 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Rnf149Q3U2C5 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Rnf149Q3U2C5 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC17.65■□□□□ 0.42
Rnf149Q3U2C5 Gm10399-202ENSMUST00000202768 748 ntBASIC17.65■□□□□ 0.42
Rnf149Q3U2C5 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf149Q3U2C5 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.65■□□□□ 0.42
Rnf149Q3U2C5 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf149Q3U2C5 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf149Q3U2C5 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf149Q3U2C5 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Rnf149Q3U2C5 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Rnf149Q3U2C5 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Rnf149Q3U2C5 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
Rnf149Q3U2C5 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf149Q3U2C5 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf149Q3U2C5 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Rnf149Q3U2C5 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC17.64■□□□□ 0.41
Rnf149Q3U2C5 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf149Q3U2C5 Gm9959-201ENSMUST00000068277 390 ntBASIC17.64■□□□□ 0.41
Rnf149Q3U2C5 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf149Q3U2C5 Gm43909-201ENSMUST00000203443 1876 ntBASIC17.64■□□□□ 0.41
Rnf149Q3U2C5 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf149Q3U2C5 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
Rnf149Q3U2C5 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf149Q3U2C5 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf149Q3U2C5 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf149Q3U2C5 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf149Q3U2C5 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf149Q3U2C5 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf149Q3U2C5 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf149Q3U2C5 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf149Q3U2C5 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC17.63■□□□□ 0.41
Rnf149Q3U2C5 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC17.63■□□□□ 0.41
Rnf149Q3U2C5 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf149Q3U2C5 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC17.63■□□□□ 0.41
Rnf149Q3U2C5 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf149Q3U2C5 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Rnf149Q3U2C5 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms