Protein–RNA interactions for Protein: Q32KG4

Rtl9, Retrotransposon Gag-like protein 9, mousemouse

Predictions only

Length 1,339 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl9Q32KG4 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rtl9Q32KG4 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Rtl9Q32KG4 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC21.01■□□□□ 0.95
Rtl9Q32KG4 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC21.01■□□□□ 0.95
Rtl9Q32KG4 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Rtl9Q32KG4 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Rtl9Q32KG4 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Rtl9Q32KG4 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rtl9Q32KG4 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Rtl9Q32KG4 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rtl9Q32KG4 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC21■□□□□ 0.95
Rtl9Q32KG4 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC21■□□□□ 0.95
Rtl9Q32KG4 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rtl9Q32KG4 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC21■□□□□ 0.95
Rtl9Q32KG4 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rtl9Q32KG4 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rtl9Q32KG4 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rtl9Q32KG4 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rtl9Q32KG4 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rtl9Q32KG4 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Rtl9Q32KG4 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Rtl9Q32KG4 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Rtl9Q32KG4 Gm7160-202ENSMUST00000188519 1027 ntBASIC20.99■□□□□ 0.95
Rtl9Q32KG4 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rtl9Q32KG4 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rtl9Q32KG4 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rtl9Q32KG4 Gm6085-201ENSMUST00000182774 1470 ntBASIC20.98■□□□□ 0.95
Rtl9Q32KG4 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC20.98■□□□□ 0.95
Rtl9Q32KG4 Spcs1-204ENSMUST00000226782 949 ntBASIC20.98■□□□□ 0.95
Rtl9Q32KG4 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rtl9Q32KG4 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Rtl9Q32KG4 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rtl9Q32KG4 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Rtl9Q32KG4 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rtl9Q32KG4 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rtl9Q32KG4 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rtl9Q32KG4 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rtl9Q32KG4 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Rtl9Q32KG4 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rtl9Q32KG4 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC20.97■□□□□ 0.95
Rtl9Q32KG4 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rtl9Q32KG4 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rtl9Q32KG4 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rtl9Q32KG4 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Rtl9Q32KG4 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rtl9Q32KG4 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Rtl9Q32KG4 Mir6236-201ENSMUST00000184437 123 ntBASIC20.96■□□□□ 0.95
Rtl9Q32KG4 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Rtl9Q32KG4 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rtl9Q32KG4 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Rtl9Q32KG4 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
Rtl9Q32KG4 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
Rtl9Q32KG4 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rtl9Q32KG4 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Rtl9Q32KG4 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rtl9Q32KG4 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rtl9Q32KG4 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Rtl9Q32KG4 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rtl9Q32KG4 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rtl9Q32KG4 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Rtl9Q32KG4 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Rtl9Q32KG4 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rtl9Q32KG4 Gm27045-201ENSMUST00000182145 1402 ntBASIC20.94■□□□□ 0.94
Rtl9Q32KG4 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC20.94■□□□□ 0.94
Rtl9Q32KG4 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rtl9Q32KG4 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rtl9Q32KG4 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Rtl9Q32KG4 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Rtl9Q32KG4 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Rtl9Q32KG4 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rtl9Q32KG4 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rtl9Q32KG4 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Rtl9Q32KG4 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC20.94■□□□□ 0.94
Rtl9Q32KG4 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rtl9Q32KG4 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Rtl9Q32KG4 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rtl9Q32KG4 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rtl9Q32KG4 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rtl9Q32KG4 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rtl9Q32KG4 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.93■□□□□ 0.94
Rtl9Q32KG4 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rtl9Q32KG4 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Rtl9Q32KG4 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Rtl9Q32KG4 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.93■□□□□ 0.94
Rtl9Q32KG4 Slc35b2-207ENSMUST00000226086 850 ntBASIC20.93■□□□□ 0.94
Rtl9Q32KG4 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Rtl9Q32KG4 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rtl9Q32KG4 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rtl9Q32KG4 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Rtl9Q32KG4 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Rtl9Q32KG4 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Rtl9Q32KG4 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Rtl9Q32KG4 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rtl9Q32KG4 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Rtl9Q32KG4 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rtl9Q32KG4 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rtl9Q32KG4 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rtl9Q32KG4 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rtl9Q32KG4 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rtl9Q32KG4 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms